SMTL ID : 8gnj.1

Human SARM1 bounded with NMN and Nanobody-C6, Conformation 2

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-2-1-mer

Ligands

1 x NMN: BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE(Non-covalent)

NMN.1: 14 residues within 4Å: Chain A: W.103, R.110, E.149, Q.150, L.152, V.153, R.157, H.190, K.193, S.316, D.317, T.318, Q.320, G.321 11 PLIP interactions: 11 interactions with chain A Hydrogen bonds: A:R.110, A:L.152, A:A.154, A:H.190, A:Q.320, A:G.321, A:G.321 Salt bridges: A:R.157, A:K.193 pi-Stacking: A:W.103, A:W.103

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hou, Y.N. et al., A conformation-specific nanobody targeting the nicotinamide mononucleotide-activated state of SARM1. Nat Commun (2022)

Release Date

2023-01-18

Peptides

NAD(+) hydrolase SARM1: AB
Nanobody-C6: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

NAD(+) hydrolase SARM1

Nanobody-C6

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