SMTL ID : 8gqm.1

Crystal structure of Thiolase complexed with acetyl coenzyme A

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.45 Å

Oligo State

homo-dimer

Ligands

2 x ACO: ACETYL COENZYME *A(Non-covalent)

ACO.1: 23 residues within 4Å: Chain A: K.41, S.112, M.147, M.169, H.195, R.228, T.231, L.236, L.239, F.243, A.249, A.250, S.252, S.253, P.254, L.255, M.294, A.324, F.325, H.354, L.356, C.384, A.386 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:F.243, A:L.255 Hydrogen bonds: A:S.112, A:R.228, A:R.228, A:T.231, A:T.231, A:S.253, A:L.255 Water bridges: A:S.253, A:S.253, A:A.386 Salt bridges: A:K.41 pi-Cation interactions: A:R.228 ACO.3: 23 residues within 4Å: Chain B: K.41, S.112, M.147, M.169, H.195, R.228, T.231, L.236, L.239, F.243, A.249, A.250, S.252, S.253, P.254, L.255, M.294, A.324, F.325, H.354, L.356, C.384, A.386 13 PLIP interactions: 13 interactions with chain B Hydrophobic interactions: B:F.243, B:L.255 Hydrogen bonds: B:S.112, B:R.228, B:R.228, B:T.231, B:S.253, B:L.255 Water bridges: B:S.253, B:S.253, B:A.386 Salt bridges: B:K.41 pi-Cation interactions: B:R.228

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 6 residues within 4Å: Chain A: E.174, A.177, E.178, V.182, S.183, S.246 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:E.174, A:S.246 Water bridges: A:E.174, A:R.184, A:R.184 GOL.4: 6 residues within 4Å: Chain B: E.174, A.177, E.178, V.182, S.183, S.246 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:E.174, B:S.246 Water bridges: B:R.184, B:R.184

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hong, J. et al., Structure of thiolase from Pseudomonas aeruginosa PAO1. To Be Published

Release Date

2024-03-13

Peptides

Thiolase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Thiolase