SMTL ID : 8grv.1

Dictyostelium discoideum Lactate dehydrogenase (DicLDHA)with NAD

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.90 Å

Oligo State

monomer

Ligands

2 x ACT: ACETATE ION(Non-functional Binders)

ACT.1: 2 residues within 4Å: Chain A: N.235, S.236 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:N.235 ACT.2: 5 residues within 4Å: Chain A: A.102, P.123, Y.125, P.127 Ligands: NAD.3 No protein-ligand interaction detected (PLIP)

1 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)

NAD.3: 26 residues within 4Å: Chain A: Y.125, V.130, G.176, T.177, G.178, N.179, I.180, Y.199, D.200, I.201, I.202, H.231, T.232, P.233, N.235, Q.237, T.238, V.259, S.260, R.261, D.285, H.322, Q.323, A.324, W.325 Ligands: ACT.2 17 PLIP interactions: 17 interactions with chain A Hydrophobic interactions: A:V.130, A:I.180 Hydrogen bonds: A:N.179, A:N.179, A:I.180, A:D.200, A:I.201, A:I.202, A:N.235, A:S.260, A:D.285, A:D.285, A:W.325 Water bridges: A:G.178, A:G.181, A:L.234, A:L.234

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dao, O. et al., Dictyostelium discoideum Lactate dehydrogenase (DicLDHA). To Be Published

Release Date

2022-10-26

Peptides

Putative D-lactate dehydrogenase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Putative D-lactate dehydrogenase