SMTL ID : 8gt6.1

human STING With agonist HB3089

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

homo-dimer

Ligands

1 x WJ6: 1-[(2E)-4-{5-carbamoyl-2-[(1-ethyl-3-methyl-1H-pyrazole-5-carbonyl)amino]-7-[3-(morpholin-4-yl)propoxy]-1H-benzimidazol-1-yl}but-2-en-1-yl]-2-[(1-ethyl-3-methyl-1H-pyrazole-5-carbonyl)amino]-7-methyl-1H-furo[3,2-e]benzimidazole-5-carboxamide(Non-covalent)

WJ6.1: 19 residues within 4Å: Chain A: L.159, S.162, Y.163, G.166, Y.167, R.238, V.239, Y.240, S.241, P.264 Chain B: S.162, Y.163, G.166, Y.167, R.238, V.239, Y.240, S.241, P.264 16 PLIP interactions: 7 interactions with chain B, 9 interactions with chain A Hydrophobic interactions: B:Y.167, B:Y.240, B:P.264, A:L.159, A:Y.163, A:Y.167, A:Y.167, A:R.238, A:P.264 Hydrogen bonds: B:Y.167, B:S.241, B:S.241, A:Y.167, A:S.241, A:S.241 pi-Stacking: B:Y.163

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Xie, Z. et al., Structural insights into a shared mechanism of human STING activation by a potent agonist and an autoimmune disease-associated mutation. Cell Discov (2022)

Release Date

2022-12-28

Peptides

Stimulator of interferon genes protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Membrane

We predict this structure to be a membrane protein.
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Stimulator of interferon genes protein