SMTL ID : 8gti.1

Corticotropin-releasing hormone receptor 1(CRF1R) bound with BMK-C205 by XFEL

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

hetero-1-1-mer

Ligands

5 x OLA: OLEIC ACID(Non-covalent)

OLA.1: 8 residues within 4Å: Chain A: A.213, V.216, L.217, L.220, F.256, V.259, F.260, F.263 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:A.213, A:V.216, A:L.220, A:F.256 OLA.2: 7 residues within 4Å: Chain A: Y.22, C.26, L.29, V.30, L.33, V.34, F.68 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:Y.22, A:L.29, A:F.68 OLA.3: 4 residues within 4Å: Chain A: W.85, L.88, V.89, A.92 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:W.85, A:W.85, A:L.88 OLA.4: 3 residues within 4Å: Chain A: C.131, G.135, V.136 No protein-ligand interaction detected (PLIP) OLA.5: 10 residues within 4Å: Chain A: L.62, A.91, A.92, Y.95, F.96, W.134, F.138, I.141, V.142, A.145 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:A.91, A:Y.95

1 x 0JS: 8-(4-bromanyl-2,6-dimethoxy-phenyl)-~{N}-butyl-~{N}-(cyclopropylmethyl)-2,7-dimethyl-pyrazolo[1,5-a][1,3,5]triazin-4-amine(Non-covalent)

0JS.6: 22 residues within 4Å: Chain A: F.60, R.63, N.100, F.101, M.104, F.105, E.107, G.108, V.177, L.178, N.181, F.182, L.185, I.188, T.214, L.217, L.218, L.221, G.222, Y.225, Q.253, F.260 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:F.60, A:F.101, A:N.181, A:L.221, A:Y.225 Hydrogen bonds: A:N.181

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kim, H. et al., Structure-based drug discovery of a corticotropin-releasing hormone receptor 1 antagonist using an X-ray free-electron laser. Exp.Mol.Med. (2023)

Release Date

2023-09-13

Peptides

Isoform CRF-R2 of Corticotropin-releasing factor receptor 1: A
Endolysin: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Membrane

We predict this structure to be a membrane protein.
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Isoform CRF-R2 of Corticotropin-releasing factor receptor 1

Endolysin

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