SMTL ID : 8gu1.1

Crystal Structure of putative amino acid binding periplasmic ABC transporter protein from Candidatus Liberibacter asiaticus in complex with Pimozide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.65 Å

Oligo State

homo-dimer

Ligands

2 x 1II: 3-[1-[4,4-bis(4-fluorophenyl)butyl]piperidin-4-yl]-1~{H}-benzimidazol-2-one(Non-covalent)

1II.1: 16 residues within 4Å: Chain A: T.14, D.15, Y.18, S.22, V.58, L.61, V.74, N.75, A.77, R.82, H.95, T.125, D.126, L.127, F.144, P.162 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:Y.18, A:V.58, A:L.61, A:L.61, A:V.74, A:N.75, A:T.125, A:L.127, A:F.144, A:P.162 Hydrogen bonds: A:R.82, A:R.82 pi-Stacking: A:Y.18 1II.2: 19 residues within 4Å: Chain A: S.240 Chain B: T.14, D.15, S.22, V.58, L.61, V.74, N.75, A.77, T.79, R.82, H.95, V.97, I.122, T.125, D.126, L.127, F.144, P.162 13 PLIP interactions: 13 interactions with chain B Hydrophobic interactions: B:T.14, B:V.58, B:V.58, B:L.61, B:V.74, B:A.77, B:V.97, B:T.125, B:L.127, B:P.162 Hydrogen bonds: B:T.79, B:R.82, B:R.82

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lonare, S. et al., Identification and evaluation of potential inhibitor molecules against TcyA from Candidatus Liberibacter asiaticus. J.Struct.Biol. (2023)

Release Date

2023-07-26

Peptides

Putative amino acid-binding periplasmic ABC transporter protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Putative amino acid-binding periplasmic ABC transporter protein

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