SMTL ID : 8gyt.1

Cryo-EM structure of human Pannexin-3 R36S/F40R variant in pre-open state.

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

homo-heptamer

Ligands

7 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 3 residues within 4Å: Chain A: N.71, T.253, H.254 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.71 NAG.2: 2 residues within 4Å: Chain B: N.71, H.254 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:N.71 NAG.3: 2 residues within 4Å: Chain C: N.71, H.254 1 PLIP interactions: 1 interactions with chain C Hydrogen bonds: C:N.71 NAG.4: 3 residues within 4Å: Chain D: P.69, N.71, H.254 2 PLIP interactions: 2 interactions with chain D Hydrophobic interactions: D:P.69 Hydrogen bonds: D:N.71 NAG.5: 3 residues within 4Å: Chain E: N.71, T.253, H.254 1 PLIP interactions: 1 interactions with chain E Hydrogen bonds: E:N.71 NAG.6: 2 residues within 4Å: Chain F: N.71, H.254 1 PLIP interactions: 1 interactions with chain F Hydrogen bonds: F:N.71 NAG.7: 2 residues within 4Å: Chain G: N.71, H.254 1 PLIP interactions: 1 interactions with chain G Hydrogen bonds: G:N.71

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cong, Y. et al., Inner channel lipids regulated gating mechanism of human pannexins. To Be Published

Release Date

2024-04-17

Peptides

Pannexin-3: ABCDEFG

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

G
G

Membrane

We predict this structure to be a membrane protein.
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Pannexin-3