SMTL ID : 8gz6.2 (1 other biounit)

Crystal structure of neutralizing VHH P17 in complex with SARS-CoV-2 Alpha variant spike receptor-binding domain

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.35 Å

Oligo State

monomer

Ligands

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 4 residues within 4Å: Chain A: Y.32, N.33, G.99, G.100 Ligand excluded by PLIP CL.2: 3 residues within 4Å: Chain A: E.44, R.45, R.105 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yamaguchi, K. et al., Structural insights into the rational design of a nanobody that binds with high affinity to the SARS-CoV-2 spike variant. J.Biochem. (2023)

Release Date

2022-12-07

Peptides

Nanobody P17: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Nanobody P17

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