SMTL ID : 8gze.2 (1 other biounit)

Crystal Structure of human METTL9-SAH-SLC39A7 peptide complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.40 Å

Oligo State

monomer

Ligands

1 x GLY- HIS- THR- HIS- GLU: Zinc transporter SLC39A7(Non-covalent)

GLY-HIS-THR-HIS-GLU.1: 18 residues within 4Å: Chain A: T.63, N.66, R.71, G.72, M.74, N.158, D.161, R.162, V.189, Y.195, E.197, Y.243, C.245, D.248, Y.254, V.255, L.256 Ligands: SAH.2 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:Y.243, A:L.256 Hydrogen bonds: A:N.66, A:R.71, A:R.71, A:G.72, A:R.162, A:Y.195, A:E.197, A:Y.243 Salt bridges: A:R.162 pi-Stacking: A:Y.243 pi-Cation interactions: A:R.162

1 x SAH: S-ADENOSYL-L-HOMOCYSTEINE(Non-covalent)

SAH.2: 15 residues within 4Å: Chain A: T.63, V.76, G.101, A.102, G.103, T.121, E.122, L.123, I.141, L.157, N.158, L.159, R.162, Y.243 Ligands: GLY-HIS-THR-HIS-GLU.1 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:N.158 Hydrogen bonds: A:L.123, A:L.157, A:N.158, A:Y.243

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhao, W. et al., Molecular basis for protein histidine N1-specific methylation of the "His-x-His" motifs by METTL9. Cell Insight (2023)

Release Date

2023-05-31

Peptides

Protein-L-histidine N-pros-methyltransferase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Protein-L-histidine N-pros-methyltransferase

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