SMTL ID : 8h0a.2 (1 other biounit)

Structure of the thermolabile hemolysin from Vibrio alginolyticus (in complex with lauric acid)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.94 Å

Oligo State

monomer

Ligands

1 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 2 residues within 4Å: Chain A: E.210, D.265 4 PLIP interactions: 2 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:E.210, A:D.265, H2O.2, H2O.3

2 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.2: 5 residues within 4Å: Chain A: Y.48, W.68, D.76, D.125, R.127 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:D.76, A:R.127, A:R.127 PEG.3: 3 residues within 4Å: Chain A: A.319, M.322, A.326 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wang, C. et al., Catalytic site flexibility facilitates the substrate and catalytic promiscuity of Vibrio dual lipase/transferase. Nat Commun (2023)

Release Date

2023-08-16

Peptides

SGNH/GDSL hydrolase family protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

SGNH/GDSL hydrolase family protein

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