SMTL ID : 8h1m.1

Crystal structure of glucose-2-epimerase mutant_D254A from Runella slithyformis Runsl_4512

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

homo-dimer

Ligands

4 x FMT: FORMIC ACID(Non-functional Binders)

FMT.1: 6 residues within 4Å: Chain A: H.190, H.272, E.275, W.335, H.403 Ligands: FMT.2 No protein-ligand interaction detected (PLIP) FMT.2: 4 residues within 4Å: Chain A: R.59, W.335, H.403 Ligands: FMT.1 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.59, A:R.59, A:Y.118, A:W.335 FMT.3: 6 residues within 4Å: Chain B: H.190, H.272, E.275, W.335, H.403 Ligands: FMT.4 2 PLIP interactions: 2 interactions with chain B Water bridges: B:Y.118, B:Y.118 FMT.4: 4 residues within 4Å: Chain B: R.59, W.335, H.403 Ligands: FMT.3 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:R.59, B:R.59, B:W.335

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wang, H. et al., Structural insights into the substrate specificity and activity of a novel mannose 2-epimerase from Runella slithyformis. Acta Crystallogr D Struct Biol (2023)

Release Date

2023-07-12

Peptides

N-acylglucosamine 2-epimerase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

N-acylglucosamine 2-epimerase