SMTL ID : 8h41.1 (1 other biounit)

Crystal structure of a decarboxylase from Trichosporon moniliiforme in complex with o-nitrophenol

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.78 Å

Oligo State

monomer

Ligands

1 x OPO: O-NITROPHENOL(Non-covalent)

OPO.1: 9 residues within 4Å: Chain A: E.16, Y.35, H.177, P.199, F.203, H.232, D.306, Y.309 Ligands: MG.2 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:Y.35, A:P.199, A:Y.309 Hydrogen bonds: A:H.177 Water bridges: A:D.306 pi-Stacking: A:Y.35, A:F.203, A:Y.309

1 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 4 residues within 4Å: Chain A: E.16, H.177, D.306 Ligands: OPO.1 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:E.16, A:H.177, A:D.306, H2O.9

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chen, F. et al., A Combined Computational-Experimental Study on the Substrate Binding and Reaction Mechanism of Salicylic Acid Decarboxylase. Catalysts (2022)

Release Date

2023-08-16

Peptides

Salicylate decarboxylase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Salicylate decarboxylase

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