SMTL ID : 8h4h.1

The apo structure of Aspergillomarasmine A synthetase

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

homo-tetramer

Ligands

4 x PLP: PYRIDOXAL-5'-PHOSPHATE(Covalent)

PLP.1: 15 residues within 4Å: Chain A: K.67, S.94, G.202, M.203, G.204, T.205, S.206, G.207, T.208, P.237, G.238, P.239, S.284, C.322, D.323 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:K.67 Hydrogen bonds: A:S.94, A:G.202, A:G.204, A:T.205, A:S.206, A:G.207, A:T.208, A:S.284 Salt bridges: A:K.67 PLP.2: 15 residues within 4Å: Chain B: V.66, K.67, S.94, M.203, G.204, T.205, S.206, T.208, P.237, G.238, P.239, S.284, C.322, D.323, Y.328 13 PLIP interactions: 13 interactions with chain B Hydrophobic interactions: B:V.66, B:K.67 Hydrogen bonds: B:S.94, B:S.94, B:G.204, B:T.205, B:S.206, B:G.207, B:T.208, B:T.208, B:T.208, B:S.284 Salt bridges: B:K.67 PLP.3: 15 residues within 4Å: Chain C: K.67, S.94, G.202, M.203, G.204, T.205, S.206, G.207, T.208, P.237, G.238, P.239, S.284, C.322, D.323 11 PLIP interactions: 11 interactions with chain C Hydrophobic interactions: C:K.67 Hydrogen bonds: C:S.94, C:G.202, C:G.204, C:T.205, C:S.206, C:G.207, C:T.208, C:T.208, C:S.284 Salt bridges: C:K.67 PLP.4: 15 residues within 4Å: Chain D: V.66, K.67, S.94, M.203, G.204, T.205, S.206, T.208, P.237, G.238, P.239, S.284, C.322, D.323, Y.328 12 PLIP interactions: 12 interactions with chain D Hydrophobic interactions: D:V.66, D:K.67 Hydrogen bonds: D:S.94, D:S.94, D:G.204, D:T.205, D:S.206, D:G.207, D:T.208, D:T.208, D:S.284 Salt bridges: D:K.67

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lu, M. et al., The apo structure of Aspergillomarasmine A synthetase at 2.3 Angstroms resolution. To Be Published

Release Date

2023-10-18

Peptides

Rhodanese domain-containing protein: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
N

B
A

C
N

D
A

Rhodanese domain-containing protein