SMTL ID : 8h6s.2 (1 other biounit)

Structure of acyltransferase VinK in complex with the loading acyl carrier protein of vicenistatin PKS

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.00 Å

Oligo State

hetero-1-1-mer

Ligands

1 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 5 residues within 4Å: Chain A: E.125, D.263, Q.264, S.282, R.285 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:E.125, A:D.263, A:D.263, A:S.282

1 x 9EF: N-[2-(acetylamino)ethyl]-N~3~-[(2R)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alaninamide(Covalent)

9EF.2: 11 residues within 4Å: Chain A: C.122, S.166, C.193, M.201, Y.225, H.232, L.287, S.311, L.312 Chain B: D.86, S.87 5 PLIP interactions: 3 interactions with chain A, 2 interactions with chain B Hydrophobic interactions: A:H.232, A:L.312 Hydrogen bonds: A:S.166, B:S.87, B:L.88

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Miyanaga, A. et al., Structural Basis of Transient Interactions of Acyltransferase VinK with the Loading Acyl Carrier Protein of the Vicenistatin Modular Polyketide Synthase. Biochemistry (2023)

Release Date

2022-12-21

Peptides

Malonyl-CoA-[acyl-carrier-protein] transacylase: A
Polyketide synthase modules 1-3: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
D

Malonyl-CoA-[acyl-carrier-protein] transacylase

Polyketide synthase modules 1-3

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