SMTL ID : 8h75.1

FGFR2 in complex with YJ001

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.75 Å

Oligo State

homo-tetramer

Ligands

4 x KX0: Tinengotinib(Non-covalent)

KX0.1: 9 residues within 4Å: Chain A: L.31, V.39, A.59, E.109, A.111, K.113, G.114, N.115, L.177 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:V.39, A:N.115 Hydrogen bonds: A:E.109, A:A.111, A:A.111 KX0.3: 10 residues within 4Å: Chain B: L.31, V.39, A.59, E.109, Y.110, A.111, S.112, G.114, N.115, L.177 4 PLIP interactions: 4 interactions with chain B Hydrophobic interactions: B:Y.110 Hydrogen bonds: B:E.109, B:A.111, B:A.111 KX0.4: 9 residues within 4Å: Chain C: L.31, V.39, A.59, V.108, E.109, Y.110, A.111, N.115, L.177 4 PLIP interactions: 4 interactions with chain C Hydrophobic interactions: C:V.108 Hydrogen bonds: C:E.109, C:A.111, C:A.111 KX0.5: 10 residues within 4Å: Chain D: L.31, V.39, A.59, E.109, Y.110, A.111, S.112, G.114, E.118, L.177 5 PLIP interactions: 5 interactions with chain D Hydrophobic interactions: D:A.59, D:Y.110 Hydrogen bonds: D:E.109, D:A.111, D:A.111

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 4 residues within 4Å: Chain A: P.288, S.289 Chain B: P.288, S.289 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yan, X.E. et al., FGFR2 in complex with YJ001. To Be Published

Release Date

2023-10-25

Peptides

Fibroblast growth factor receptor 2: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Fibroblast growth factor receptor 2