SMTL ID : 8h8n.1

Crystal structure of apo-R52Y/E56Y/R59Y/E63Y-rHLFr

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

homo-24-mer

Ligands

48 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 6 residues within 4Å: Chain A: Y.36, V.42, G.90, T.91, E.163 Chain O: R.153 Ligand excluded by PLIP EDO.2: 4 residues within 4Å: Chain A: T.10, E.11, A.14, R.18 Ligand excluded by PLIP EDO.13: 6 residues within 4Å: Chain B: Y.36, V.42, G.90, T.91, E.163 Chain P: R.153 Ligand excluded by PLIP EDO.14: 4 residues within 4Å: Chain B: T.10, E.11, A.14, R.18 Ligand excluded by PLIP EDO.25: 6 residues within 4Å: Chain C: Y.36, V.42, G.90, T.91, E.163 Chain N: R.153 Ligand excluded by PLIP EDO.26: 4 residues within 4Å: Chain C: T.10, E.11, A.14, R.18 Ligand excluded by PLIP EDO.37: 6 residues within 4Å: Chain D: Y.36, V.42, G.90, T.91, E.163 Chain M: R.153 Ligand excluded by PLIP EDO.38: 4 residues within 4Å: Chain D: T.10, E.11, A.14, R.18 Ligand excluded by PLIP EDO.49: 6 residues within 4Å: Chain E: Y.36, V.42, G.90, T.91, E.163 Chain U: R.153 Ligand excluded by PLIP EDO.50: 4 residues within 4Å: Chain E: T.10, E.11, A.14, R.18 Ligand excluded by PLIP EDO.61: 6 residues within 4Å: Chain F: Y.36, V.42, G.90, T.91, E.163 Chain V: R.153 Ligand excluded by PLIP EDO.62: 4 residues within 4Å: Chain F: T.10, E.11, A.14, R.18 Ligand excluded by PLIP EDO.73: 6 residues within 4Å: Chain G: Y.36, V.42, G.90, T.91, E.163 Chain X: R.153 Ligand excluded by PLIP EDO.74: 4 residues within 4Å: Chain G: T.10, E.11, A.14, R.18 Ligand excluded by PLIP EDO.85: 6 residues within 4Å: Chain H: Y.36, V.42, G.90, T.91, E.163 Chain W: R.153 Ligand excluded by PLIP EDO.86: 4 residues within 4Å: Chain H: T.10, E.11, A.14, R.18 Ligand excluded by PLIP EDO.97: 6 residues within 4Å: Chain I: Y.36, V.42, G.90, T.91, E.163 Chain R: R.153 Ligand excluded by PLIP EDO.98: 4 residues within 4Å: Chain I: T.10, E.11, A.14, R.18 Ligand excluded by PLIP EDO.109: 6 residues within 4Å: Chain J: Y.36, V.42, G.90, T.91, E.163 Chain Q: R.153 Ligand excluded by PLIP EDO.110: 4 residues within 4Å: Chain J: T.10, E.11, A.14, R.18 Ligand excluded by PLIP EDO.121: 6 residues within 4Å: Chain K: Y.36, V.42, G.90, T.91, E.163 Chain S: R.153 Ligand excluded by PLIP EDO.122: 4 residues within 4Å: Chain K: T.10, E.11, A.14, R.18 Ligand excluded by PLIP EDO.133: 6 residues within 4Å: Chain L: Y.36, V.42, G.90, T.91, E.163 Chain T: R.153 Ligand excluded by PLIP EDO.134: 4 residues within 4Å: Chain L: T.10, E.11, A.14, R.18 Ligand excluded by PLIP EDO.145: 6 residues within 4Å: Chain C: R.153 Chain M: Y.36, V.42, G.90, T.91, E.163 Ligand excluded by PLIP EDO.146: 4 residues within 4Å: Chain M: T.10, E.11, A.14, R.18 Ligand excluded by PLIP EDO.157: 6 residues within 4Å: Chain D: R.153 Chain N: Y.36, V.42, G.90, T.91, E.163 Ligand excluded by PLIP EDO.158: 4 residues within 4Å: Chain N: T.10, E.11, A.14, R.18 Ligand excluded by PLIP EDO.169: 6 residues within 4Å: Chain B: R.153 Chain O: Y.36, V.42, G.90, T.91, E.163 Ligand excluded by PLIP EDO.170: 4 residues within 4Å: Chain O: T.10, E.11, A.14, R.18 Ligand excluded by PLIP EDO.181: 6 residues within 4Å: Chain A: R.153 Chain P: Y.36, V.42, G.90, T.91, E.163 Ligand excluded by PLIP EDO.182: 4 residues within 4Å: Chain P: T.10, E.11, A.14, R.18 Ligand excluded by PLIP EDO.193: 6 residues within 4Å: Chain I: R.153 Chain Q: Y.36, V.42, G.90, T.91, E.163 Ligand excluded by PLIP EDO.194: 4 residues within 4Å: Chain Q: T.10, E.11, A.14, R.18 Ligand excluded by PLIP EDO.205: 6 residues within 4Å: Chain J: R.153 Chain R: Y.36, V.42, G.90, T.91, E.163 Ligand excluded by PLIP EDO.206: 4 residues within 4Å: Chain R: T.10, E.11, A.14, R.18 Ligand excluded by PLIP EDO.217: 6 residues within 4Å: Chain L: R.153 Chain S: Y.36, V.42, G.90, T.91, E.163 Ligand excluded by PLIP EDO.218: 4 residues within 4Å: Chain S: T.10, E.11, A.14, R.18 Ligand excluded by PLIP EDO.229: 6 residues within 4Å: Chain K: R.153 Chain T: Y.36, V.42, G.90, T.91, E.163 Ligand excluded by PLIP EDO.230: 4 residues within 4Å: Chain T: T.10, E.11, A.14, R.18 Ligand excluded by PLIP EDO.241: 6 residues within 4Å: Chain F: R.153 Chain U: Y.36, V.42, G.90, T.91, E.163 Ligand excluded by PLIP EDO.242: 4 residues within 4Å: Chain U: T.10, E.11, A.14, R.18 Ligand excluded by PLIP EDO.253: 6 residues within 4Å: Chain E: R.153 Chain V: Y.36, V.42, G.90, T.91, E.163 Ligand excluded by PLIP EDO.254: 4 residues within 4Å: Chain V: T.10, E.11, A.14, R.18 Ligand excluded by PLIP EDO.265: 6 residues within 4Å: Chain G: R.153 Chain W: Y.36, V.42, G.90, T.91, E.163 Ligand excluded by PLIP EDO.266: 4 residues within 4Å: Chain W: T.10, E.11, A.14, R.18 Ligand excluded by PLIP EDO.277: 6 residues within 4Å: Chain H: R.153 Chain X: Y.36, V.42, G.90, T.91, E.163 Ligand excluded by PLIP EDO.278: 4 residues within 4Å: Chain X: T.10, E.11, A.14, R.18 Ligand excluded by PLIP

192 x CD: CADMIUM ION(Non-covalent)

CD.3: 2 residues within 4Å: Chain A: E.45, H.49 Ligand excluded by PLIP CD.4: 8 residues within 4Å: Chain A: D.127 Chain E: D.127 Chain I: D.127 Ligands: CD.10, CD.52, CD.58, CD.100, CD.106 Ligand excluded by PLIP CD.5: 8 residues within 4Å: Chain A: E.130 Chain E: E.130 Chain I: E.130 Ligands: CD.7, CD.53, CD.55, CD.101, CD.103 Ligand excluded by PLIP CD.6: 2 residues within 4Å: Chain A: D.80 Ligands: CL.12 Ligand excluded by PLIP CD.7: 8 residues within 4Å: Chain A: E.130 Chain E: E.130 Chain I: E.130 Ligands: CD.5, CD.53, CD.55, CD.101, CD.103 Ligand excluded by PLIP CD.8: 1 residues within 4Å: Chain A: H.132 Ligand excluded by PLIP CD.9: 1 residues within 4Å: Chain A: E.45 Ligand excluded by PLIP CD.10: 8 residues within 4Å: Chain A: S.131 Chain E: S.131 Chain I: S.131 Ligands: CD.4, CD.52, CD.58, CD.100, CD.106 Ligand excluded by PLIP CD.15: 2 residues within 4Å: Chain B: E.45, H.49 Ligand excluded by PLIP CD.16: 8 residues within 4Å: Chain B: D.127 Chain G: D.127 Chain L: D.127 Ligands: CD.22, CD.76, CD.82, CD.136, CD.142 Ligand excluded by PLIP CD.17: 8 residues within 4Å: Chain B: E.130 Chain G: E.130 Chain L: E.130 Ligands: CD.19, CD.77, CD.79, CD.137, CD.139 Ligand excluded by PLIP CD.18: 2 residues within 4Å: Chain B: D.80 Ligands: CL.24 Ligand excluded by PLIP CD.19: 8 residues within 4Å: Chain B: E.130 Chain G: E.130 Chain L: E.130 Ligands: CD.17, CD.77, CD.79, CD.137, CD.139 Ligand excluded by PLIP CD.20: 1 residues within 4Å: Chain B: H.132 Ligand excluded by PLIP CD.21: 1 residues within 4Å: Chain B: E.45 Ligand excluded by PLIP CD.22: 8 residues within 4Å: Chain B: S.131 Chain G: S.131 Chain L: S.131 Ligands: CD.16, CD.76, CD.82, CD.136, CD.142 Ligand excluded by PLIP CD.27: 2 residues within 4Å: Chain C: E.45, H.49 Ligand excluded by PLIP CD.28: 8 residues within 4Å: Chain C: D.127 Chain H: D.127 Chain J: D.127 Ligands: CD.34, CD.88, CD.94, CD.112, CD.118 Ligand excluded by PLIP CD.29: 8 residues within 4Å: Chain C: E.130 Chain H: E.130 Chain J: E.130 Ligands: CD.31, CD.89, CD.91, CD.113, CD.115 Ligand excluded by PLIP CD.30: 2 residues within 4Å: Chain C: D.80 Ligands: CL.36 Ligand excluded by PLIP CD.31: 8 residues within 4Å: Chain C: E.130 Chain H: E.130 Chain J: E.130 Ligands: CD.29, CD.89, CD.91, CD.113, CD.115 Ligand excluded by PLIP CD.32: 1 residues within 4Å: Chain C: H.132 Ligand excluded by PLIP CD.33: 1 residues within 4Å: Chain C: E.45 Ligand excluded by PLIP CD.34: 8 residues within 4Å: Chain C: S.131 Chain H: S.131 Chain J: S.131 Ligands: CD.28, CD.88, CD.94, CD.112, CD.118 Ligand excluded by PLIP CD.39: 2 residues within 4Å: Chain D: E.45, H.49 Ligand excluded by PLIP CD.40: 8 residues within 4Å: Chain D: D.127 Chain F: D.127 Chain K: D.127 Ligands: CD.46, CD.64, CD.70, CD.124, CD.130 Ligand excluded by PLIP CD.41: 8 residues within 4Å: Chain D: E.130 Chain F: E.130 Chain K: E.130 Ligands: CD.43, CD.65, CD.67, CD.125, CD.127 Ligand excluded by PLIP CD.42: 2 residues within 4Å: Chain D: D.80 Ligands: CL.48 Ligand excluded by PLIP CD.43: 8 residues within 4Å: Chain D: E.130 Chain F: E.130 Chain K: E.130 Ligands: CD.41, CD.65, CD.67, CD.125, CD.127 Ligand excluded by PLIP CD.44: 1 residues within 4Å: Chain D: H.132 Ligand excluded by PLIP CD.45: 1 residues within 4Å: Chain D: E.45 Ligand excluded by PLIP CD.46: 8 residues within 4Å: Chain D: S.131 Chain F: S.131 Chain K: S.131 Ligands: CD.40, CD.64, CD.70, CD.124, CD.130 Ligand excluded by PLIP CD.51: 2 residues within 4Å: Chain E: E.45, H.49 Ligand excluded by PLIP CD.52: 8 residues within 4Å: Chain A: D.127 Chain E: D.127 Chain I: D.127 Ligands: CD.4, CD.10, CD.58, CD.100, CD.106 Ligand excluded by PLIP CD.53: 8 residues within 4Å: Chain A: E.130 Chain E: E.130 Chain I: E.130 Ligands: CD.5, CD.7, CD.55, CD.101, CD.103 Ligand excluded by PLIP CD.54: 2 residues within 4Å: Chain E: D.80 Ligands: CL.60 Ligand excluded by PLIP CD.55: 8 residues within 4Å: Chain A: E.130 Chain E: E.130 Chain I: E.130 Ligands: CD.5, CD.7, CD.53, CD.101, CD.103 Ligand excluded by PLIP CD.56: 1 residues within 4Å: Chain E: H.132 Ligand excluded by PLIP CD.57: 1 residues within 4Å: Chain E: E.45 Ligand excluded by PLIP CD.58: 8 residues within 4Å: Chain A: S.131 Chain E: S.131 Chain I: S.131 Ligands: CD.4, CD.10, CD.52, CD.100, CD.106 Ligand excluded by PLIP CD.63: 2 residues within 4Å: Chain F: E.45, H.49 Ligand excluded by PLIP CD.64: 8 residues within 4Å: Chain D: D.127 Chain F: D.127 Chain K: D.127 Ligands: CD.40, CD.46, CD.70, CD.124, CD.130 Ligand excluded by PLIP CD.65: 8 residues within 4Å: Chain D: E.130 Chain F: E.130 Chain K: E.130 Ligands: CD.41, CD.43, CD.67, CD.125, CD.127 Ligand excluded by PLIP CD.66: 2 residues within 4Å: Chain F: D.80 Ligands: CL.72 Ligand excluded by PLIP CD.67: 8 residues within 4Å: Chain D: E.130 Chain F: E.130 Chain K: E.130 Ligands: CD.41, CD.43, CD.65, CD.125, CD.127 Ligand excluded by PLIP CD.68: 1 residues within 4Å: Chain F: H.132 Ligand excluded by PLIP CD.69: 1 residues within 4Å: Chain F: E.45 Ligand excluded by PLIP CD.70: 8 residues within 4Å: Chain D: S.131 Chain F: S.131 Chain K: S.131 Ligands: CD.40, CD.46, CD.64, CD.124, CD.130 Ligand excluded by PLIP CD.75: 2 residues within 4Å: Chain G: E.45, H.49 Ligand excluded by PLIP CD.76: 8 residues within 4Å: Chain B: D.127 Chain G: D.127 Chain L: D.127 Ligands: CD.16, CD.22, CD.82, CD.136, CD.142 Ligand excluded by PLIP CD.77: 8 residues within 4Å: Chain B: E.130 Chain G: E.130 Chain L: E.130 Ligands: CD.17, CD.19, CD.79, CD.137, CD.139 Ligand excluded by PLIP CD.78: 2 residues within 4Å: Chain G: D.80 Ligands: CL.84 Ligand excluded by PLIP CD.79: 8 residues within 4Å: Chain B: E.130 Chain G: E.130 Chain L: E.130 Ligands: CD.17, CD.19, CD.77, CD.137, CD.139 Ligand excluded by PLIP CD.80: 1 residues within 4Å: Chain G: H.132 Ligand excluded by PLIP CD.81: 1 residues within 4Å: Chain G: E.45 Ligand excluded by PLIP CD.82: 8 residues within 4Å: Chain B: S.131 Chain G: S.131 Chain L: S.131 Ligands: CD.16, CD.22, CD.76, CD.136, CD.142 Ligand excluded by PLIP CD.87: 2 residues within 4Å: Chain H: E.45, H.49 Ligand excluded by PLIP CD.88: 8 residues within 4Å: Chain C: D.127 Chain H: D.127 Chain J: D.127 Ligands: CD.28, CD.34, CD.94, CD.112, CD.118 Ligand excluded by PLIP CD.89: 8 residues within 4Å: Chain C: E.130 Chain H: E.130 Chain J: E.130 Ligands: CD.29, CD.31, CD.91, CD.113, CD.115 Ligand excluded by PLIP CD.90: 2 residues within 4Å: Chain H: D.80 Ligands: CL.96 Ligand excluded by PLIP CD.91: 8 residues within 4Å: Chain C: E.130 Chain H: E.130 Chain J: E.130 Ligands: CD.29, CD.31, CD.89, CD.113, CD.115 Ligand excluded by PLIP CD.92: 1 residues within 4Å: Chain H: H.132 Ligand excluded by PLIP CD.93: 1 residues within 4Å: Chain H: E.45 Ligand excluded by PLIP CD.94: 8 residues within 4Å: Chain C: S.131 Chain H: S.131 Chain J: S.131 Ligands: CD.28, CD.34, CD.88, CD.112, CD.118 Ligand excluded by PLIP CD.99: 2 residues within 4Å: Chain I: E.45, H.49 Ligand excluded by PLIP CD.100: 8 residues within 4Å: Chain A: D.127 Chain E: D.127 Chain I: D.127 Ligands: CD.4, CD.10, CD.52, CD.58, CD.106 Ligand excluded by PLIP CD.101: 8 residues within 4Å: Chain A: E.130 Chain E: E.130 Chain I: E.130 Ligands: CD.5, CD.7, CD.53, CD.55, CD.103 Ligand excluded by PLIP CD.102: 2 residues within 4Å: Chain I: D.80 Ligands: CL.108 Ligand excluded by PLIP CD.103: 8 residues within 4Å: Chain A: E.130 Chain E: E.130 Chain I: E.130 Ligands: CD.5, CD.7, CD.53, CD.55, CD.101 Ligand excluded by PLIP CD.104: 1 residues within 4Å: Chain I: H.132 Ligand excluded by PLIP CD.105: 1 residues within 4Å: Chain I: E.45 Ligand excluded by PLIP CD.106: 8 residues within 4Å: Chain A: S.131 Chain E: S.131 Chain I: S.131 Ligands: CD.4, CD.10, CD.52, CD.58, CD.100 Ligand excluded by PLIP CD.111: 2 residues within 4Å: Chain J: E.45, H.49 Ligand excluded by PLIP CD.112: 8 residues within 4Å: Chain C: D.127 Chain H: D.127 Chain J: D.127 Ligands: CD.28, CD.34, CD.88, CD.94, CD.118 Ligand excluded by PLIP CD.113: 8 residues within 4Å: Chain C: E.130 Chain H: E.130 Chain J: E.130 Ligands: CD.29, CD.31, CD.89, CD.91, CD.115 Ligand excluded by PLIP CD.114: 2 residues within 4Å: Chain J: D.80 Ligands: CL.120 Ligand excluded by PLIP CD.115: 8 residues within 4Å: Chain C: E.130 Chain H: E.130 Chain J: E.130 Ligands: CD.29, CD.31, CD.89, CD.91, CD.113 Ligand excluded by PLIP CD.116: 1 residues within 4Å: Chain J: H.132 Ligand excluded by PLIP CD.117: 1 residues within 4Å: Chain J: E.45 Ligand excluded by PLIP CD.118: 8 residues within 4Å: Chain C: S.131 Chain H: S.131 Chain J: S.131 Ligands: CD.28, CD.34, CD.88, CD.94, CD.112 Ligand excluded by PLIP CD.123: 2 residues within 4Å: Chain K: E.45, H.49 Ligand excluded by PLIP CD.124: 8 residues within 4Å: Chain D: D.127 Chain F: D.127 Chain K: D.127 Ligands: CD.40, CD.46, CD.64, CD.70, CD.130 Ligand excluded by PLIP CD.125: 8 residues within 4Å: Chain D: E.130 Chain F: E.130 Chain K: E.130 Ligands: CD.41, CD.43, CD.65, CD.67, CD.127 Ligand excluded by PLIP CD.126: 2 residues within 4Å: Chain K: D.80 Ligands: CL.132 Ligand excluded by PLIP CD.127: 8 residues within 4Å: Chain D: E.130 Chain F: E.130 Chain K: E.130 Ligands: CD.41, CD.43, CD.65, CD.67, CD.125 Ligand excluded by PLIP CD.128: 1 residues within 4Å: Chain K: H.132 Ligand excluded by PLIP CD.129: 1 residues within 4Å: Chain K: E.45 Ligand excluded by PLIP CD.130: 8 residues within 4Å: Chain D: S.131 Chain F: S.131 Chain K: S.131 Ligands: CD.40, CD.46, CD.64, CD.70, CD.124 Ligand excluded by PLIP CD.135: 2 residues within 4Å: Chain L: E.45, H.49 Ligand excluded by PLIP CD.136: 8 residues within 4Å: Chain B: D.127 Chain G: D.127 Chain L: D.127 Ligands: CD.16, CD.22, CD.76, CD.82, CD.142 Ligand excluded by PLIP CD.137: 8 residues within 4Å: Chain B: E.130 Chain G: E.130 Chain L: E.130 Ligands: CD.17, CD.19, CD.77, CD.79, CD.139 Ligand excluded by PLIP CD.138: 2 residues within 4Å: Chain L: D.80 Ligands: CL.144 Ligand excluded by PLIP CD.139: 8 residues within 4Å: Chain B: E.130 Chain G: E.130 Chain L: E.130 Ligands: CD.17, CD.19, CD.77, CD.79, CD.137 Ligand excluded by PLIP CD.140: 1 residues within 4Å: Chain L: H.132 Ligand excluded by PLIP CD.141: 1 residues within 4Å: Chain L: E.45 Ligand excluded by PLIP CD.142: 8 residues within 4Å: Chain B: S.131 Chain G: S.131 Chain L: S.131 Ligands: CD.16, CD.22, CD.76, CD.82, CD.136 Ligand excluded by PLIP CD.147: 2 residues within 4Å: Chain M: E.45, H.49 Ligand excluded by PLIP CD.148: 8 residues within 4Å: Chain M: D.127 Chain Q: D.127 Chain U: D.127 Ligands: CD.154, CD.196, CD.202, CD.244, CD.250 Ligand excluded by PLIP CD.149: 8 residues within 4Å: Chain M: E.130 Chain Q: E.130 Chain U: E.130 Ligands: CD.151, CD.197, CD.199, CD.245, CD.247 Ligand excluded by PLIP CD.150: 2 residues within 4Å: Chain M: D.80 Ligands: CL.156 Ligand excluded by PLIP CD.151: 8 residues within 4Å: Chain M: E.130 Chain Q: E.130 Chain U: E.130 Ligands: CD.149, CD.197, CD.199, CD.245, CD.247 Ligand excluded by PLIP CD.152: 1 residues within 4Å: Chain M: H.132 Ligand excluded by PLIP CD.153: 1 residues within 4Å: Chain M: E.45 Ligand excluded by PLIP CD.154: 8 residues within 4Å: Chain M: S.131 Chain Q: S.131 Chain U: S.131 Ligands: CD.148, CD.196, CD.202, CD.244, CD.250 Ligand excluded by PLIP CD.159: 2 residues within 4Å: Chain N: E.45, H.49 Ligand excluded by PLIP CD.160: 8 residues within 4Å: Chain N: D.127 Chain S: D.127 Chain X: D.127 Ligands: CD.166, CD.220, CD.226, CD.280, CD.286 Ligand excluded by PLIP CD.161: 8 residues within 4Å: Chain N: E.130 Chain S: E.130 Chain X: E.130 Ligands: CD.163, CD.221, CD.223, CD.281, CD.283 Ligand excluded by PLIP CD.162: 2 residues within 4Å: Chain N: D.80 Ligands: CL.168 Ligand excluded by PLIP CD.163: 8 residues within 4Å: Chain N: E.130 Chain S: E.130 Chain X: E.130 Ligands: CD.161, CD.221, CD.223, CD.281, CD.283 Ligand excluded by PLIP CD.164: 1 residues within 4Å: Chain N: H.132 Ligand excluded by PLIP CD.165: 1 residues within 4Å: Chain N: E.45 Ligand excluded by PLIP CD.166: 8 residues within 4Å: Chain N: S.131 Chain S: S.131 Chain X: S.131 Ligands: CD.160, CD.220, CD.226, CD.280, CD.286 Ligand excluded by PLIP CD.171: 2 residues within 4Å: Chain O: E.45, H.49 Ligand excluded by PLIP CD.172: 8 residues within 4Å: Chain O: D.127 Chain T: D.127 Chain V: D.127 Ligands: CD.178, CD.232, CD.238, CD.256, CD.262 Ligand excluded by PLIP CD.173: 8 residues within 4Å: Chain O: E.130 Chain T: E.130 Chain V: E.130 Ligands: CD.175, CD.233, CD.235, CD.257, CD.259 Ligand excluded by PLIP CD.174: 2 residues within 4Å: Chain O: D.80 Ligands: CL.180 Ligand excluded by PLIP CD.175: 8 residues within 4Å: Chain O: E.130 Chain T: E.130 Chain V: E.130 Ligands: CD.173, CD.233, CD.235, CD.257, CD.259 Ligand excluded by PLIP CD.176: 1 residues within 4Å: Chain O: H.132 Ligand excluded by PLIP CD.177: 1 residues within 4Å: Chain O: E.45 Ligand excluded by PLIP CD.178: 8 residues within 4Å: Chain O: S.131 Chain T: S.131 Chain V: S.131 Ligands: CD.172, CD.232, CD.238, CD.256, CD.262 Ligand excluded by PLIP CD.183: 2 residues within 4Å: Chain P: E.45, H.49 Ligand excluded by PLIP CD.184: 8 residues within 4Å: Chain P: D.127 Chain R: D.127 Chain W: D.127 Ligands: CD.190, CD.208, CD.214, CD.268, CD.274 Ligand excluded by PLIP CD.185: 8 residues within 4Å: Chain P: E.130 Chain R: E.130 Chain W: E.130 Ligands: CD.187, CD.209, CD.211, CD.269, CD.271 Ligand excluded by PLIP CD.186: 2 residues within 4Å: Chain P: D.80 Ligands: CL.192 Ligand excluded by PLIP CD.187: 8 residues within 4Å: Chain P: E.130 Chain R: E.130 Chain W: E.130 Ligands: CD.185, CD.209, CD.211, CD.269, CD.271 Ligand excluded by PLIP CD.188: 1 residues within 4Å: Chain P: H.132 Ligand excluded by PLIP CD.189: 1 residues within 4Å: Chain P: E.45 Ligand excluded by PLIP CD.190: 8 residues within 4Å: Chain P: S.131 Chain R: S.131 Chain W: S.131 Ligands: CD.184, CD.208, CD.214, CD.268, CD.274 Ligand excluded by PLIP CD.195: 2 residues within 4Å: Chain Q: E.45, H.49 Ligand excluded by PLIP CD.196: 8 residues within 4Å: Chain M: D.127 Chain Q: D.127 Chain U: D.127 Ligands: CD.148, CD.154, CD.202, CD.244, CD.250 Ligand excluded by PLIP CD.197: 8 residues within 4Å: Chain M: E.130 Chain Q: E.130 Chain U: E.130 Ligands: CD.149, CD.151, CD.199, CD.245, CD.247 Ligand excluded by PLIP CD.198: 2 residues within 4Å: Chain Q: D.80 Ligands: CL.204 Ligand excluded by PLIP CD.199: 8 residues within 4Å: Chain M: E.130 Chain Q: E.130 Chain U: E.130 Ligands: CD.149, CD.151, CD.197, CD.245, CD.247 Ligand excluded by PLIP CD.200: 1 residues within 4Å: Chain Q: H.132 Ligand excluded by PLIP CD.201: 1 residues within 4Å: Chain Q: E.45 Ligand excluded by PLIP CD.202: 8 residues within 4Å: Chain M: S.131 Chain Q: S.131 Chain U: S.131 Ligands: CD.148, CD.154, CD.196, CD.244, CD.250 Ligand excluded by PLIP CD.207: 2 residues within 4Å: Chain R: E.45, H.49 Ligand excluded by PLIP CD.208: 8 residues within 4Å: Chain P: D.127 Chain R: D.127 Chain W: D.127 Ligands: CD.184, CD.190, CD.214, CD.268, CD.274 Ligand excluded by PLIP CD.209: 8 residues within 4Å: Chain P: E.130 Chain R: E.130 Chain W: E.130 Ligands: CD.185, CD.187, CD.211, CD.269, CD.271 Ligand excluded by PLIP CD.210: 2 residues within 4Å: Chain R: D.80 Ligands: CL.216 Ligand excluded by PLIP CD.211: 8 residues within 4Å: Chain P: E.130 Chain R: E.130 Chain W: E.130 Ligands: CD.185, CD.187, CD.209, CD.269, CD.271 Ligand excluded by PLIP CD.212: 1 residues within 4Å: Chain R: H.132 Ligand excluded by PLIP CD.213: 1 residues within 4Å: Chain R: E.45 Ligand excluded by PLIP CD.214: 8 residues within 4Å: Chain P: S.131 Chain R: S.131 Chain W: S.131 Ligands: CD.184, CD.190, CD.208, CD.268, CD.274 Ligand excluded by PLIP CD.219: 2 residues within 4Å: Chain S: E.45, H.49 Ligand excluded by PLIP CD.220: 8 residues within 4Å: Chain N: D.127 Chain S: D.127 Chain X: D.127 Ligands: CD.160, CD.166, CD.226, CD.280, CD.286 Ligand excluded by PLIP CD.221: 8 residues within 4Å: Chain N: E.130 Chain S: E.130 Chain X: E.130 Ligands: CD.161, CD.163, CD.223, CD.281, CD.283 Ligand excluded by PLIP CD.222: 2 residues within 4Å: Chain S: D.80 Ligands: CL.228 Ligand excluded by PLIP CD.223: 8 residues within 4Å: Chain N: E.130 Chain S: E.130 Chain X: E.130 Ligands: CD.161, CD.163, CD.221, CD.281, CD.283 Ligand excluded by PLIP CD.224: 1 residues within 4Å: Chain S: H.132 Ligand excluded by PLIP CD.225: 1 residues within 4Å: Chain S: E.45 Ligand excluded by PLIP CD.226: 8 residues within 4Å: Chain N: S.131 Chain S: S.131 Chain X: S.131 Ligands: CD.160, CD.166, CD.220, CD.280, CD.286 Ligand excluded by PLIP CD.231: 2 residues within 4Å: Chain T: E.45, H.49 Ligand excluded by PLIP CD.232: 8 residues within 4Å: Chain O: D.127 Chain T: D.127 Chain V: D.127 Ligands: CD.172, CD.178, CD.238, CD.256, CD.262 Ligand excluded by PLIP CD.233: 8 residues within 4Å: Chain O: E.130 Chain T: E.130 Chain V: E.130 Ligands: CD.173, CD.175, CD.235, CD.257, CD.259 Ligand excluded by PLIP CD.234: 2 residues within 4Å: Chain T: D.80 Ligands: CL.240 Ligand excluded by PLIP CD.235: 8 residues within 4Å: Chain O: E.130 Chain T: E.130 Chain V: E.130 Ligands: CD.173, CD.175, CD.233, CD.257, CD.259 Ligand excluded by PLIP CD.236: 1 residues within 4Å: Chain T: H.132 Ligand excluded by PLIP CD.237: 1 residues within 4Å: Chain T: E.45 Ligand excluded by PLIP CD.238: 8 residues within 4Å: Chain O: S.131 Chain T: S.131 Chain V: S.131 Ligands: CD.172, CD.178, CD.232, CD.256, CD.262 Ligand excluded by PLIP CD.243: 2 residues within 4Å: Chain U: E.45, H.49 Ligand excluded by PLIP CD.244: 8 residues within 4Å: Chain M: D.127 Chain Q: D.127 Chain U: D.127 Ligands: CD.148, CD.154, CD.196, CD.202, CD.250 Ligand excluded by PLIP CD.245: 8 residues within 4Å: Chain M: E.130 Chain Q: E.130 Chain U: E.130 Ligands: CD.149, CD.151, CD.197, CD.199, CD.247 Ligand excluded by PLIP CD.246: 2 residues within 4Å: Chain U: D.80 Ligands: CL.252 Ligand excluded by PLIP CD.247: 8 residues within 4Å: Chain M: E.130 Chain Q: E.130 Chain U: E.130 Ligands: CD.149, CD.151, CD.197, CD.199, CD.245 Ligand excluded by PLIP CD.248: 1 residues within 4Å: Chain U: H.132 Ligand excluded by PLIP CD.249: 1 residues within 4Å: Chain U: E.45 Ligand excluded by PLIP CD.250: 8 residues within 4Å: Chain M: S.131 Chain Q: S.131 Chain U: S.131 Ligands: CD.148, CD.154, CD.196, CD.202, CD.244 Ligand excluded by PLIP CD.255: 2 residues within 4Å: Chain V: E.45, H.49 Ligand excluded by PLIP CD.256: 8 residues within 4Å: Chain O: D.127 Chain T: D.127 Chain V: D.127 Ligands: CD.172, CD.178, CD.232, CD.238, CD.262 Ligand excluded by PLIP CD.257: 8 residues within 4Å: Chain O: E.130 Chain T: E.130 Chain V: E.130 Ligands: CD.173, CD.175, CD.233, CD.235, CD.259 Ligand excluded by PLIP CD.258: 2 residues within 4Å: Chain V: D.80 Ligands: CL.264 Ligand excluded by PLIP CD.259: 8 residues within 4Å: Chain O: E.130 Chain T: E.130 Chain V: E.130 Ligands: CD.173, CD.175, CD.233, CD.235, CD.257 Ligand excluded by PLIP CD.260: 1 residues within 4Å: Chain V: H.132 Ligand excluded by PLIP CD.261: 1 residues within 4Å: Chain V: E.45 Ligand excluded by PLIP CD.262: 8 residues within 4Å: Chain O: S.131 Chain T: S.131 Chain V: S.131 Ligands: CD.172, CD.178, CD.232, CD.238, CD.256 Ligand excluded by PLIP CD.267: 2 residues within 4Å: Chain W: E.45, H.49 Ligand excluded by PLIP CD.268: 8 residues within 4Å: Chain P: D.127 Chain R: D.127 Chain W: D.127 Ligands: CD.184, CD.190, CD.208, CD.214, CD.274 Ligand excluded by PLIP CD.269: 8 residues within 4Å: Chain P: E.130 Chain R: E.130 Chain W: E.130 Ligands: CD.185, CD.187, CD.209, CD.211, CD.271 Ligand excluded by PLIP CD.270: 2 residues within 4Å: Chain W: D.80 Ligands: CL.276 Ligand excluded by PLIP CD.271: 8 residues within 4Å: Chain P: E.130 Chain R: E.130 Chain W: E.130 Ligands: CD.185, CD.187, CD.209, CD.211, CD.269 Ligand excluded by PLIP CD.272: 1 residues within 4Å: Chain W: H.132 Ligand excluded by PLIP CD.273: 1 residues within 4Å: Chain W: E.45 Ligand excluded by PLIP CD.274: 8 residues within 4Å: Chain P: S.131 Chain R: S.131 Chain W: S.131 Ligands: CD.184, CD.190, CD.208, CD.214, CD.268 Ligand excluded by PLIP CD.279: 2 residues within 4Å: Chain X: E.45, H.49 Ligand excluded by PLIP CD.280: 8 residues within 4Å: Chain N: D.127 Chain S: D.127 Chain X: D.127 Ligands: CD.160, CD.166, CD.220, CD.226, CD.286 Ligand excluded by PLIP CD.281: 8 residues within 4Å: Chain N: E.130 Chain S: E.130 Chain X: E.130 Ligands: CD.161, CD.163, CD.221, CD.223, CD.283 Ligand excluded by PLIP CD.282: 2 residues within 4Å: Chain X: D.80 Ligands: CL.288 Ligand excluded by PLIP CD.283: 8 residues within 4Å: Chain N: E.130 Chain S: E.130 Chain X: E.130 Ligands: CD.161, CD.163, CD.221, CD.223, CD.281 Ligand excluded by PLIP CD.284: 1 residues within 4Å: Chain X: H.132 Ligand excluded by PLIP CD.285: 1 residues within 4Å: Chain X: E.45 Ligand excluded by PLIP CD.286: 8 residues within 4Å: Chain N: S.131 Chain S: S.131 Chain X: S.131 Ligands: CD.160, CD.166, CD.220, CD.226, CD.280 Ligand excluded by PLIP

24 x SO4: SULFATE ION(Non-functional Binders)

SO4.11: 2 residues within 4Å: Chain A: Q.6, N.7 Ligand excluded by PLIP SO4.23: 2 residues within 4Å: Chain B: Q.6, N.7 Ligand excluded by PLIP SO4.35: 2 residues within 4Å: Chain C: Q.6, N.7 Ligand excluded by PLIP SO4.47: 2 residues within 4Å: Chain D: Q.6, N.7 Ligand excluded by PLIP SO4.59: 2 residues within 4Å: Chain E: Q.6, N.7 Ligand excluded by PLIP SO4.71: 2 residues within 4Å: Chain F: Q.6, N.7 Ligand excluded by PLIP SO4.83: 2 residues within 4Å: Chain G: Q.6, N.7 Ligand excluded by PLIP SO4.95: 2 residues within 4Å: Chain H: Q.6, N.7 Ligand excluded by PLIP SO4.107: 2 residues within 4Å: Chain I: Q.6, N.7 Ligand excluded by PLIP SO4.119: 2 residues within 4Å: Chain J: Q.6, N.7 Ligand excluded by PLIP SO4.131: 2 residues within 4Å: Chain K: Q.6, N.7 Ligand excluded by PLIP SO4.143: 2 residues within 4Å: Chain L: Q.6, N.7 Ligand excluded by PLIP SO4.155: 2 residues within 4Å: Chain M: Q.6, N.7 Ligand excluded by PLIP SO4.167: 2 residues within 4Å: Chain N: Q.6, N.7 Ligand excluded by PLIP SO4.179: 2 residues within 4Å: Chain O: Q.6, N.7 Ligand excluded by PLIP SO4.191: 2 residues within 4Å: Chain P: Q.6, N.7 Ligand excluded by PLIP SO4.203: 2 residues within 4Å: Chain Q: Q.6, N.7 Ligand excluded by PLIP SO4.215: 2 residues within 4Å: Chain R: Q.6, N.7 Ligand excluded by PLIP SO4.227: 2 residues within 4Å: Chain S: Q.6, N.7 Ligand excluded by PLIP SO4.239: 2 residues within 4Å: Chain T: Q.6, N.7 Ligand excluded by PLIP SO4.251: 2 residues within 4Å: Chain U: Q.6, N.7 Ligand excluded by PLIP SO4.263: 2 residues within 4Å: Chain V: Q.6, N.7 Ligand excluded by PLIP SO4.275: 2 residues within 4Å: Chain W: Q.6, N.7 Ligand excluded by PLIP SO4.287: 2 residues within 4Å: Chain X: Q.6, N.7 Ligand excluded by PLIP

24 x CL: CHLORIDE ION(Non-functional Binders)

CL.12: 3 residues within 4Å: Chain A: D.80 Chain V: Q.82 Ligands: CD.6 Ligand excluded by PLIP CL.24: 3 residues within 4Å: Chain B: D.80 Chain W: Q.82 Ligands: CD.18 Ligand excluded by PLIP CL.36: 3 residues within 4Å: Chain C: D.80 Chain X: Q.82 Ligands: CD.30 Ligand excluded by PLIP CL.48: 3 residues within 4Å: Chain D: D.80 Chain U: Q.82 Ligands: CD.42 Ligand excluded by PLIP CL.60: 3 residues within 4Å: Chain E: D.80 Chain Q: Q.82 Ligands: CD.54 Ligand excluded by PLIP CL.72: 3 residues within 4Å: Chain F: D.80 Chain T: Q.82 Ligands: CD.66 Ligand excluded by PLIP CL.84: 3 residues within 4Å: Chain G: D.80 Chain S: Q.82 Ligands: CD.78 Ligand excluded by PLIP CL.96: 3 residues within 4Å: Chain H: D.80 Chain R: Q.82 Ligands: CD.90 Ligand excluded by PLIP CL.108: 3 residues within 4Å: Chain I: D.80 Chain P: Q.82 Ligands: CD.102 Ligand excluded by PLIP CL.120: 3 residues within 4Å: Chain J: D.80 Chain M: Q.82 Ligands: CD.114 Ligand excluded by PLIP CL.132: 3 residues within 4Å: Chain K: D.80 Chain N: Q.82 Ligands: CD.126 Ligand excluded by PLIP CL.144: 3 residues within 4Å: Chain L: D.80 Chain O: Q.82 Ligands: CD.138 Ligand excluded by PLIP CL.156: 3 residues within 4Å: Chain J: Q.82 Chain M: D.80 Ligands: CD.150 Ligand excluded by PLIP CL.168: 3 residues within 4Å: Chain K: Q.82 Chain N: D.80 Ligands: CD.162 Ligand excluded by PLIP CL.180: 3 residues within 4Å: Chain L: Q.82 Chain O: D.80 Ligands: CD.174 Ligand excluded by PLIP CL.192: 3 residues within 4Å: Chain I: Q.82 Chain P: D.80 Ligands: CD.186 Ligand excluded by PLIP CL.204: 3 residues within 4Å: Chain E: Q.82 Chain Q: D.80 Ligands: CD.198 Ligand excluded by PLIP CL.216: 3 residues within 4Å: Chain H: Q.82 Chain R: D.80 Ligands: CD.210 Ligand excluded by PLIP CL.228: 3 residues within 4Å: Chain G: Q.82 Chain S: D.80 Ligands: CD.222 Ligand excluded by PLIP CL.240: 3 residues within 4Å: Chain F: Q.82 Chain T: D.80 Ligands: CD.234 Ligand excluded by PLIP CL.252: 3 residues within 4Å: Chain D: Q.82 Chain U: D.80 Ligands: CD.246 Ligand excluded by PLIP CL.264: 3 residues within 4Å: Chain A: Q.82 Chain V: D.80 Ligands: CD.258 Ligand excluded by PLIP CL.276: 3 residues within 4Å: Chain B: Q.82 Chain W: D.80 Ligands: CD.270 Ligand excluded by PLIP CL.288: 3 residues within 4Å: Chain C: Q.82 Chain X: D.80 Ligands: CD.282 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hishikawa, Y. et al., Elucidating Conformational Dynamics and Thermostability of Designed Aromatic Clusters by Using Protein Cages. Chemistry (2023)

Release Date

2023-10-04

Peptides

Ferritin light chain: ABCDEFGHIJKLMNOPQRSTUVWX

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

D
A

E
A

F
A

G
A

H
A

I
A

J
A

K
A

L
A

M
A

N
A

O
A

P
A

Q
A

R
A

S
A

T
A

U
A

V
A

W
A

X
A

Ferritin light chain