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SMTL ID : 8hc4.1

SARS-CoV-2 wildtype spike trimer (6P) in complex with 3 YB9-258 Fabs and 3 R1-32 Fabs (3 RBD up)

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-3-3-3-3-3-mer
Ligands
12 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
30 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Yu, H. et al., Somatically hypermutated antibodies isolated from SARS-CoV-2 Delta infected patients cross-neutralize heterologous variants. Nat Commun (2023)
Release Date
2023-01-25
Peptides
Spike glycoprotein: ABC
Heavy chain of R1-32 Fab: DJN
Light chain of R1-32 Fab: EKO
Heavy chain of YB9-258: FHL
Light chain of YB9-258 Fab: GIM
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
B
C
C
D
D
J
K
N
N
E
E
K
M
O
O
F
F
H
H
L
G
G
J
I
L
M
I

Spike glycoprotein

Toggle Identical (ABC)

Heavy chain of R1-32 Fab

Toggle Identical (DJN)

Light chain of R1-32 Fab

Toggle Identical (EKO)

Heavy chain of YB9-258

Toggle Identical (FHL)

Light chain of YB9-258 Fab

Toggle Identical (GIM)

Related Entries With Identical Sequence

7chh.1 | 7u0p.1 | 7u0q.1 | 7u0x.1 | 7uow.1 | 7y6k.1 | 7yc5.1 | 7ydi.1 | 7ydy.1 | 7ye5.1 | 7ye9.1 | 7yeg.1 | 8gnh.1 | 8hc2.1 | 8hc3.1 | 8hc5.1 | 8hc6.1