SMTL ID : 8hcb.1

SARS-CoV-2 Omicron BA.1 spike trimer (6P) in complex with 3 YB13-292 Fabs (2 RBD up)

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-3-3-3-mer
Ligands
12 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
30 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Yu, H. et al., Somatically hypermutated antibodies isolated from SARS-CoV-2 Delta infected patients cross-neutralize heterologous variants. Nat Commun (2023)
Release Date
2023-01-25
Peptides
Spike glycoprotein: ABC
Light chain of YB13-292 Fab: DFG
Heavy chain of YB13-292 Fab: EHI
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
B
C
C
D
E
F
L
G
G
E
F
H
H
I
D

Spike glycoprotein

Toggle Identical (ABC)

Light chain of YB13-292 Fab

Toggle Identical (DFG)

Heavy chain of YB13-292 Fab

Toggle Identical (EHI)

Related Entries With Identical Sequence

8hc2.1 | 8hc3.1 | 8hc8.1 | 8hc9.1 | 8hca.1