SMTL ID : 8hdf.1

Full length crystal structure of mycobacterium tuberculosis FadD23 in complex with ANP and PLM

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.24 Å

Oligo State

monomer

Ligands

1 x PLM: PALMITIC ACID(Non-covalent)

PLM.1: 18 residues within 4Å: Chain A: F.213, M.216, Y.220, H.242, D.243, M.244, V.247, L.248, V.256, F.286, L.318, S.321, A.349, G.351, L.352, A.353, V.357 Ligands: ANP.2 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:F.213, A:V.247, A:L.248, A:L.248, A:V.256, A:F.286, A:F.286, A:L.318, A:A.349, A:V.357, A:V.357 Hydrogen bonds: A:A.353 Salt bridges: A:H.242

1 x ANP: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER(Non-covalent)

ANP.2: 17 residues within 4Å: Chain A: H.242, D.243, G.320, S.321, E.322, R.323, V.324, A.349, Y.350, G.351, L.352, A.353, Y.397, D.467, I.478, R.481 Ligands: PLM.1 12 PLIP interactions: 12 interactions with chain A Hydrogen bonds: A:S.321, A:S.321, A:G.351, A:A.353, A:Y.397, A:Y.397, A:D.467 Water bridges: A:V.324, A:V.324 Salt bridges: A:H.242 pi-Stacking: A:Y.350, A:Y.350

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yan, M. et al., The Key Roles of Mycobacterium tuberculosis FadD23 C-terminal Domain in Catalytic Mechanisms. Front Microbiol (2023)

Release Date

2023-02-15

Peptides

Long-chain-fatty-acid--AMP ligase FadD23: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Long-chain-fatty-acid--AMP ligase FadD23

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