SMTL ID : 8hdg.4 (3 other biounits)

Small peptide enhances the binding of nutline-3a to MdmX

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.73 Å

Oligo State

monomer

Ligands

1 x NUT: 4-({(4S,5R)-4,5-bis(4-chlorophenyl)-2-[4-methoxy-2-(propan-2-yloxy)phenyl]-4,5-dihydro-1H-imidazol-1-yl}carbonyl)piperazin-2-one(Non-covalent)

NUT.1: 14 residues within 4Å: Chain A: M.53, L.56, G.57, I.60, M.61, Y.66, Q.71, H.72, V.74, F.90, V.92, P.95, L.98, Y.99 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:L.56, A:I.60, A:I.60, A:V.74, A:V.92

2 x O4B: 1,4,7,10,13,16-HEXAOXACYCLOOCTADECANE(Non-covalent)

O4B.2: 2 residues within 4Å: Chain A: Q.23, I.24 No protein-ligand interaction detected (PLIP) O4B.3: 7 residues within 4Å: Chain A: Q.64, L.65, Y.66, D.67, Q.68, Y.75, G.78 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cheng, X.Y. et al., Small peptide enhances the binding of nutline-3a to MdmX. To Be Published

Release Date

2022-11-30

Peptides

Uncharacterized protein DKFZp686B01123: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Uncharacterized protein DKFZp686B01123

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