SMTL ID : 8hed.1

Local refinement of the SARS-CoV-2 Spike trimer in complex with RmAb 9H1 Fab

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-mer

Ligands

1 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 1 residues within 4Å: Chain A: N.13 No protein-ligand interaction detected (PLIP)

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.2: 1 residues within 4Å: Chain A: N.1 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chu, X. et al., Mechanism of an RBM-targeted rabbit monoclonal antibody 9H1 neutralizing SARS-CoV-2. Biochem.Biophys.Res.Commun. (2023)

Release Date

2023-04-26

Peptides

Spike protein S1: A
rabbit antibody 9H1 light chain: B
rabbit antibody 9H1 heavy chain: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
F

C
G

Spike protein S1

rabbit antibody 9H1 light chain

rabbit antibody 9H1 heavy chain

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