SMTL ID : 8hkd.2 (1 other biounit)

Crystal structure of P450BSbeta-L78G/Q85F/F173S/G290I variant in complex with palmitoleic acid

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.35 Å

Oligo State

monomer

Ligands

1 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)

HEM.1: 30 residues within 4Å: Chain A: Y.59, R.66, I.84, F.85, H.92, K.96, F.99, M.103, N.239, V.240, P.243, I.244, A.246, I.247, F.289, I.290, L.293, L.318, P.351, Q.352, G.353, G.360, H.361, R.362, C.363, P.364, G.365, I.368, T.369 Ligands: PAM.2 21 PLIP interactions: 21 interactions with chain A, Hydrophobic interactions: A:I.84, A:F.85, A:F.99, A:P.243, A:I.247, A:I.247, A:F.289, A:F.289, A:L.293, A:L.318, A:Q.352, A:Q.352, A:P.364, A:I.368, A:I.368 Hydrogen bonds: A:Y.59 Salt bridges: A:R.66, A:H.92, A:K.96, A:H.361 Metal complexes: A:C.363

1 x PAM: PALMITOLEIC ACID(Non-covalent)

PAM.2: 12 residues within 4Å: Chain A: P.71, F.79, F.85, V.170, R.242, P.243, A.246, I.290, G.294, L.315 Ligands: HEM.1, PEG.4 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:P.71, A:F.79, A:F.79, A:F.85, A:I.290, A:L.315 Salt bridges: A:R.242

4 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.3: 4 residues within 4Å: Chain A: M.97, L.98, S.101, E.216 5 PLIP interactions: 5 interactions with chain A Water bridges: A:H.94, A:H.94, A:H.94, A:E.216, A:H.220 PEG.4: 4 residues within 4Å: Chain A: V.170, F.289, I.290 Ligands: PAM.2 No protein-ligand interaction detected (PLIP) PEG.5: 5 residues within 4Å: Chain A: P.106, H.107, S.210, G.211, T.212 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:P.106 Water bridges: A:R.110 PEG.6: 4 residues within 4Å: Chain A: E.344, N.345, L.346, H.356 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.345

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ma, Q. et al., Biocatalytic enantioselective gamma-C-H lactonization of aliphatic carboxylic acids. Nat Synth (2023)

Release Date

2023-11-08

Peptides

Fatty-acid peroxygenase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Fatty-acid peroxygenase

Related Entries With Identical Sequence