SMTL ID : 8hl6.1

Crystal structure of human valosin-containing protein methyltransferase

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x SAM: S-ADENOSYLMETHIONINE(Non-covalent)

SAM.1: 18 residues within 4Å: Chain A: C.40, V.41, V.42, W.43, A.46, G.75, S.76, G.77, D.96, L.97, L.100, L.124, K.125, W.126, A.143, D.144, Y.148, S.151 15 PLIP interactions: 15 interactions with chain A Hydrogen bonds: A:V.41, A:W.43, A:A.46, A:G.75, A:G.75, A:W.126, A:S.151, A:S.151 Water bridges: A:G.75, A:K.125, A:A.143 pi-Stacking: A:W.126, A:W.126, A:W.126, A:Y.148

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nguyen, T.Q. et al., Structural basis for recognition and methylation of p97 by METTL21D, a valosin-containing protein lysine methyltransferase. Iscience (2023)

Release Date

2023-07-12

Peptides

Protein N-lysine methyltransferase METTL21D: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Protein N-lysine methyltransferase METTL21D