SMTL ID : 8ho5.1

Falcilysin in complex with MMV665806

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x XUN: (2S)-1-(2,3-dimethyl-1H-indol-1-yl)-3-{[(1S,2S)-2-methylcyclohexyl]amino}propan-2-ol(Non-covalent)

XUN.1: 14 residues within 4Å: Chain A: Y.378, L.382, N.385, N.386, D.416, N.474, I.475, I.478, A.482, D.491, F.492, E.495, I.509, F.510 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:L.382, A:I.475, A:I.478, A:F.492, A:E.495, A:E.495, A:I.509, A:F.510

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 9 residues within 4Å: Chain A: N.386, L.387, H.390, T.391, S.394, A.470, S.471, V.745, I.746 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:L.387, A:A.467 Water bridges: A:V.395

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.3: 2 residues within 4Å: Chain A: Y.305, K.339 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:K.339 EDO.4: 4 residues within 4Å: Chain A: A.1146, V.1148, D.1149, G.1150 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:G.1150

1 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.5: 5 residues within 4Å: Chain A: D.765, L.768, Y.1022, E.1094, F.1102 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.1094 Water bridges: A:D.765

1 x ZN: ZINC ION(Non-covalent)

ZN.6: 3 residues within 4Å: Chain A: H.94, H.98, E.208 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.94, A:H.98, A:E.208, A:E.208, H2O.21

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wirjanata, G. et al., Identification of an inhibitory pocket in falcilysin provides a new avenue for malaria drug development. Cell Chem Biol (2024)

Release Date

2023-12-20

Peptides

Falcilysin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Falcilysin

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