SMTL ID : 8hpv.1

Cryo-EM structure of SARS-CoV-2 Omicron Prototype S-trimer in complex with fab L4.65 and L5.34

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-3-3-3-3-3-mer
Ligands
3 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Guo, S. et al., Dosing interval regimen shapes potency and breadth of antibody repertoire after vaccination of SARS-CoV-2 RBD protein subunit vaccine. Cell Discov (2023)
Release Date
2024-01-31
Peptides
Spike protein S2': AFK
fab L5.34: BIN
fab L5.34: CJO
fab L4.65: DGL
fab L4.65: EHM
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
F
B
K
C
B
M
I
E
N
R
C
N
J
F
O
S
D
H
G
P
L
I
E
L
H
Q
M
J

Spike protein S2'

Toggle Identical (AFK)

fab L5.34

Toggle Identical (BIN)

fab L5.34

Toggle Identical (CJO)

fab L4.65

Toggle Identical (DGL)

fab L4.65

Toggle Identical (EHM)

Related Entries With Identical Sequence

8hp9.1 | 8hpf.1 | 8hpq.1 | 8hpu.1 | 8hq7.1