SMTL ID : 8htb.1

Staphylococcus aureus FtsZ 12-316 complexed with TXH9179

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.30 Å

Oligo State

monomer

Ligands

1 x GDP: GUANOSINE-5'-DIPHOSPHATE(Non-covalent)

GDP.1: 17 residues within 4Å: Chain A: G.12, G.13, G.14, N.17, R.21, G.96, M.97, G.99, G.100, T.101, G.102, T.125, P.127, E.131, R.135, N.158, F.175 23 PLIP interactions: 23 interactions with chain A Hydrogen bonds: A:G.13, A:G.14, A:N.17, A:R.21, A:R.21, A:G.100, A:T.101, A:T.101, A:T.101, A:G.102, A:T.125, A:E.131, A:R.135, A:R.135, A:N.158, A:N.158 Water bridges: A:N.36, A:A.65, A:G.96, A:T.103, A:T.103 pi-Stacking: A:F.175 pi-Cation interactions: A:F.175

1 x CA: CALCIUM ION(Non-covalent)

CA.2: 5 residues within 4Å: Chain A: L.192, V.195, N.200, L.201 Ligands: ZI9.3 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:L.192, A:V.195, A:L.201, H2O.10

1 x ZI9: 3-[(6-ethynyl-[1,3]thiazolo[5,4-b]pyridin-2-yl)methoxy]-2,6-bis(fluoranyl)benzamide(Non-covalent)

ZI9.3: 22 residues within 4Å: Chain A: Q.184, G.185, G.188, D.191, L.192, V.195, S.196, G.197, V.199, N.200, L.201, M.218, G.219, I.220, N.255, G.287, T.288, V.289, T.301, V.302, I.303 Ligands: CA.2 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:Q.184, A:V.195, A:M.218, A:T.301 Hydrogen bonds: A:G.197, A:L.201, A:N.255, A:T.288 Water bridges: A:N.255

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bryan, E. et al., Structural and Antibacterial Characterization of a New Benzamide FtsZ Inhibitor with Superior Bactericidal Activity and In Vivo Efficacy Against Multidrug-Resistant Staphylococcus aureus. Acs Chem.Biol. (2023)

Release Date

2023-09-20

Peptides

Cell division protein FtsZ: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Cell division protein FtsZ

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