SMTL ID : 8hu2.1

Rattus Syntenin-1 PDZ domain with inhibitor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

monomer

Ligands

1 x M8R: (2~{S})-2-(9~{H}-fluoren-9-ylmethoxycarbonylamino)-3-(4-oxidanylidene-5~{H}-pyrimidin-2-yl)propanoic acid

M8R.1: 8 residues within 4Å: Chain A: H.99, V.100, G.101, F.102, I.103, F.104, V.113, A.146 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:H.99, A:F.104, A:V.113 Hydrogen bonds: A:G.98, A:V.100, A:G.101, A:F.102, A:F.102, A:F.104 pi-Stacking: A:H.99, A:H.99

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Heo, Y. et al., Crystal structure of STNPDZ with inhibitor at 1.60 Angstroms resolution. To Be Published

Release Date

2024-01-17

Peptides

Syntenin-1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Syntenin-1