SMTL ID : 8hw2.1

Cryo-EM structure of beta-estradiol 17-(beta-D-glucuronide)-bound human ABC transporter ABCC3 in nanodiscs

Coordinates

PDB Format

Method

ELECTRON MICROSCOPY

Oligo State

monomer

Ligands

2 x U38: Estradiol-17beta-glucuronide(Non-covalent)

U38.1: 11 residues within 4Å: Chain A: K.318, Y.371, F.375, P.425, F.426, L.429, M.584, Y.1188, N.1192, R.1193, R.1245 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:Y.371, A:F.375, A:P.425, A:F.426, A:M.584 Hydrogen bonds: A:K.318, A:K.318, A:N.1192 Salt bridges: A:R.1193, A:R.1245, A:R.1245 U38.2: 9 residues within 4Å: Chain A: W.539, M.584, Q.587, M.1089, F.1238, N.1241, W.1242, R.1245, M.1246 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:W.539, A:W.539, A:F.1238, A:W.1242, A:R.1245 Hydrogen bonds: A:Q.587, A:N.1241

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wang, J. et al., Placing steroid hormones within the human ABCC3 transporter reveals a compatible amphiphilic substrate-binding pocket. Embo J. (2023)

Release Date

2023-06-07

Peptides

ATP-binding cassette sub-family C member 3: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Membrane

We predict this structure to be a membrane protein.
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ATP-binding cassette sub-family C member 3

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