SMTL ID : 8hyc.2 (1 other biounit)

Crystal structure of B1 NDM-1 MBL in complex with 2-amino-5-(2-(thiophen-2-yl)ethyl)thiazole-4-carboxylic acid

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.15 Å

Oligo State

monomer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 7 residues within 4Å: Chain A: H.91, H.93, H.160, T.161, C.179 Ligands: ZN.2, 60J.3 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.91, A:H.93, A:H.160, H2O.3 ZN.2: 5 residues within 4Å: Chain A: D.95, C.179, H.221 Ligands: ZN.1, 60J.3 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.95, A:C.179, A:H.221, H2O.3

1 x 60J: 2-azanyl-5-(2-thiophen-2-ylethyl)-1,3-thiazole-4-carboxylic acid(Non-covalent)

60J.3: 14 residues within 4Å: Chain A: I.6, V.44, W.64, D.95, H.160, C.179, K.182, A.186, S.188, G.190, N.191, H.221 Ligands: ZN.1, ZN.2 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:K.182, A:H.221 Hydrogen bonds: A:D.95, A:N.191 Water bridges: A:D.95 Salt bridges: A:H.160, A:K.182, A:H.221 pi-Cation interactions: A:H.221

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yan, Y.-H. et al., 2-Aminothiazole-4-carboxylic acids as cross-class metallo-beta-lactamase inhibitors by mimicking beta-lactam hydrolysate binding. To Be Published

Release Date

2024-06-19

Peptides

Metallo-beta-lactamase type 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Metallo-beta-lactamase type 2

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