SMTL ID : 8hz2.1

Tumor Necrosis Factor Receptor Associated Factor 6 (TRAF6) N-terminal Domain

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

homo-dimer

Ligands

10 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.17, C.20, C.37, C.40 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.17, A:C.20, A:C.37, A:C.40 ZN.2: 6 residues within 4Å: Chain A: T.30, C.32, H.34, C.52, V.54, D.55 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.32, A:H.34, A:C.52, A:D.55 ZN.3: 4 residues within 4Å: Chain A: C.81, C.86, H.98, C.102 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.81, A:C.86, A:H.98, A:C.102 ZN.4: 4 residues within 4Å: Chain A: C.109, C.112, H.124, C.129 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.109, A:C.112, A:H.124, A:C.129 ZN.5: 4 residues within 4Å: Chain A: C.136, C.139, H.151, C.155 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.136, A:C.139, A:H.151, A:C.155 ZN.6: 4 residues within 4Å: Chain B: C.17, C.20, C.37, C.40 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.17, B:C.20, B:C.37, B:C.40 ZN.7: 5 residues within 4Å: Chain B: T.30, C.32, H.34, C.52, D.55 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.32, B:H.34, B:C.52, B:D.55 ZN.8: 4 residues within 4Å: Chain B: C.81, C.86, H.98, C.102 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.81, B:C.86, B:H.98, B:C.102 ZN.9: 6 residues within 4Å: Chain B: C.109, C.112, R.114, F.116, H.124, C.129 5 PLIP interactions: 4 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:C.109, B:C.112, B:H.124, B:C.129, H2O.1 ZN.10: 5 residues within 4Å: Chain B: C.136, C.139, H.151, D.152, C.155 4 PLIP interactions: 4 interactions with chain B Metal complexes: B:C.136, B:C.139, B:H.151, B:C.155

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Guven, O. et al., Tumor Necrosis Factor Receptor Associated Factor 6 (TRAF6) N-terminal Domain. To Be Published

Release Date

2023-01-25

Peptides

TNF receptor-associated factor 6: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

TNF receptor-associated factor 6