SMTL ID : 8i0o.1

Crystal structure of Transthyretin variant A97S in monomeric form

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.88 Å

Oligo State

homo-tetramer

Ligands

2 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)

MPD.1: 13 residues within 4Å: Chain A: A.19, M.110, L.111, S.112, S.115, Y.116, S.117 Chain B: S.117 Chain C: M.110, L.111, S.112, S.115, Y.116 3 PLIP interactions: 2 interactions with chain C, 1 interactions with chain A Hydrogen bonds: C:Y.116 Water bridges: C:S.117 Hydrophobic interactions: A:A.19 MPD.2: 10 residues within 4Å: Chain B: M.110, S.115 Chain C: S.117 Chain D: A.19, M.110, L.111, S.112, S.115, Y.116, S.117 2 PLIP interactions: 1 interactions with chain B, 1 interactions with chain D Hydrophobic interactions: B:M.110, D:A.19

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Agrawal, S. et al., Structure and dynamics of Transthyretin pathogenic variant A97S. To Be Published

Release Date

2024-01-17

Peptides

Transthyretin: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Transthyretin