SMTL ID : 8i64.1

Crystal structure of Mycobacterium tuberculosis Uracil-DNA glycosylase in complex with Barbituric acid, Form II

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.26 Å

Oligo State

monomer

Ligands

1 x BR8: BARBITURIC ACID(Non-covalent)

BR8.1: 9 residues within 4Å: Chain A: G.77, Q.78, D.79, Y.81, S.91, F.92, S.104, N.138, H.202 10 PLIP interactions: 10 interactions with chain A Hydrophobic interactions: A:Y.81 Hydrogen bonds: A:Q.78, A:D.79, A:F.92, A:S.104, A:N.138, A:N.138, A:H.202 Water bridges: A:Y.81, A:S.104

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 1 residues within 4Å: Chain A: Y.53 1 PLIP interactions: 1 interactions with chain A Water bridges: A:Y.53

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kesharwani, S. et al., Crystal structures of non-uracil ring fragments in complex with Mycobacterium tuberculosis uracil DNA glycosylase (MtUng) as a starting point for novel inhibitor design: A case study with the barbituric acid fragment. Eur.J.Med.Chem. (2023)

Release Date

2023-07-12

Peptides

Uracil-DNA glycosylase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Uracil-DNA glycosylase

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