SMTL ID : 8i6k.1

Structure of hMNDA HIN with dsDNA

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

monomer

Ligands

2 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.1: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) PEG.3: 5 residues within 4Å: Chain A: K.69 Chain B: G.8 Chain C: G.2, C.3, G.4 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:K.69, A:K.69

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 7 residues within 4Å: Chain A: M.126, C.177, Q.179, G.192, S.193, H.194, S.195 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:G.192, A:H.194, A:S.195

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Li, Y. et al., Structural mechanism of dsDNA recognition by the hMNDA HIN domain: New insights into the DNA-binding model of a PYHIN protein. Int.J.Biol.Macromol. (2023)

Release Date

2023-07-19

Peptides

Myeloid cell nuclear differentiation antigen: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Myeloid cell nuclear differentiation antigen