SMTL ID : 8i92.1

ACE2-B0AT1 complex bound with glutamine

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-2-2-mer

Ligands

14 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 5 residues within 4Å: Chain A: N.62, T.64, E.66, N.67, Q.349 1 PLIP interactions: 1 interactions with chain A Hydrophobic interactions: A:E.66 NAG-NAG.2: 3 residues within 4Å: Chain A: K.35, N.99, T.101 No protein-ligand interaction detected (PLIP) NAG-NAG.3: 4 residues within 4Å: Chain A: Q.90, Q.110, N.112, N.203 No protein-ligand interaction detected (PLIP) NAG-NAG.4: 4 residues within 4Å: Chain A: F.294, N.441, E.442, W.603 No protein-ligand interaction detected (PLIP) NAG-NAG.5: 4 residues within 4Å: Chain A: H.426, S.429, S.554, N.555 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:S.429 NAG-NAG.6: 4 residues within 4Å: Chain A: N.168, N.699, S.701, D.702 No protein-ligand interaction detected (PLIP) NAG-NAG.7: 5 residues within 4Å: Chain B: G.62, T.252, N.254, T.256, E.257 No protein-ligand interaction detected (PLIP) NAG-NAG.8: 5 residues within 4Å: Chain C: N.62, T.64, E.66, N.67, Q.349 1 PLIP interactions: 1 interactions with chain C Hydrophobic interactions: C:E.66 NAG-NAG.9: 3 residues within 4Å: Chain C: K.35, N.99, T.101 No protein-ligand interaction detected (PLIP) NAG-NAG.10: 4 residues within 4Å: Chain C: Q.90, Q.110, N.112, N.203 No protein-ligand interaction detected (PLIP) NAG-NAG.11: 4 residues within 4Å: Chain C: F.294, N.441, E.442, W.603 No protein-ligand interaction detected (PLIP) NAG-NAG.12: 4 residues within 4Å: Chain C: H.426, S.429, S.554, N.555 1 PLIP interactions: 1 interactions with chain C Hydrogen bonds: C:S.429 NAG-NAG.13: 4 residues within 4Å: Chain C: N.168, N.699, S.701, D.702 No protein-ligand interaction detected (PLIP) NAG-NAG.14: 5 residues within 4Å: Chain D: G.62, T.252, N.254, T.256, E.257 No protein-ligand interaction detected (PLIP)

10 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.15: 1 residues within 4Å: Chain A: N.331 No protein-ligand interaction detected (PLIP) NAG.18: 3 residues within 4Å: Chain B: N.178, W.192, N.472 2 PLIP interactions: 2 interactions with chain B Hydrophobic interactions: B:W.192 Hydrogen bonds: B:N.472 NAG.19: 1 residues within 4Å: Chain B: N.154 No protein-ligand interaction detected (PLIP) NAG.20: 2 residues within 4Å: Chain B: N.364, Y.371 1 PLIP interactions: 1 interactions with chain B Hydrophobic interactions: B:Y.371 NAG.21: 1 residues within 4Å: Chain B: N.350 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:N.350 NAG.22: 1 residues within 4Å: Chain C: N.331 No protein-ligand interaction detected (PLIP) NAG.25: 3 residues within 4Å: Chain D: N.178, W.192, N.472 2 PLIP interactions: 2 interactions with chain D Hydrophobic interactions: D:W.192 Hydrogen bonds: D:N.472 NAG.26: 1 residues within 4Å: Chain D: N.154 No protein-ligand interaction detected (PLIP) NAG.27: 2 residues within 4Å: Chain D: N.364, Y.371 1 PLIP interactions: 1 interactions with chain D Hydrophobic interactions: D:Y.371 NAG.28: 1 residues within 4Å: Chain D: N.350 1 PLIP interactions: 1 interactions with chain D Hydrogen bonds: D:N.350

2 x ZN: ZINC ION(Non-covalent)

ZN.16: 3 residues within 4Å: Chain A: H.383, H.387, E.411 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:H.383, A:H.387, A:E.411, A:E.411 ZN.23: 3 residues within 4Å: Chain C: H.383, H.387, E.411 4 PLIP interactions: 4 interactions with chain C Metal complexes: C:H.383, C:H.387, C:E.411, C:E.411

2 x GLN: GLUTAMINE(Non-covalent)

GLN.17: 12 residues within 4Å: Chain B: F.44, C.45, V.46, G.47, G.49, Y.125, F.273, S.274, S.276, F.279, S.427, N.431 5 PLIP interactions: 5 interactions with chain B, Hydrogen bonds: B:Y.125, B:F.273, B:S.274, B:N.431, B:N.431 GLN.24: 12 residues within 4Å: Chain D: F.44, C.45, V.46, G.47, G.49, Y.125, F.273, S.274, S.276, F.279, S.427, N.431 5 PLIP interactions: 5 interactions with chain D Hydrogen bonds: D:Y.125, D:F.273, D:S.274, D:N.431, D:N.431

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Li, Y. et al., Structural insight into the substrate recognition and transport mechanism of amino acid transporter complex ACE2-B 0 AT1 and ACE2-SIT1. Cell Discov (2023)

Release Date

2023-09-27

Peptides

Angiotensin-converting enzyme 2: AC
Sodium-dependent neutral amino acid transporter B(0)AT1: BD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

C
C

B
B

D
D

Membrane

We predict this structure to be a membrane protein.
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Angiotensin-converting enzyme 2

Sodium-dependent neutral amino acid transporter B(0)AT1

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