SMTL ID : 8ibo.1

Crystal structure of Wild-Type Mycobacterium tuberculosis ClpC1 N-terminal domain in complex with Lassomycin

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.83 Å

Oligo State

hetero-1-1-mer

Ligands

2 x ACT: ACETATE ION(Non-functional Binders)

ACT.1: 8 residues within 4Å: Chain A: G.29, T.30, E.31, T.81, R.83, A.84, G.118, V.119 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:T.30, A:T.81, A:R.83 Hydrogen bonds: A:T.30, A:T.81, A:V.119 ACT.2: 5 residues within 4Å: Chain A: R.8, R.11, L.15, H.39, E.40 3 PLIP interactions: 3 interactions with chain A Water bridges: A:R.8 Salt bridges: A:R.8, A:R.11

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jagdev, M.K. et al., Crystal structure of the N-terminal domain of MtClpC1 in complex with the anti-mycobacterial natural peptide Lassomycin. Int.J.Biol.Macromol. (2023)

Release Date

2023-09-20

Peptides

Negative regulator of genetic competence ClpC/mecB: A
Lassomycin: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
C

Negative regulator of genetic competence ClpC/mecB

Lassomycin