SMTL ID : 8ik5.1

Transcription factor LMX1a homeobox domain in complex with Wnt1 promoter

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.99 Å

Oligo State

monomer

Ligands

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 8 residues within 4Å: Chain B: A.4, G.5 Chain C: L.13, R.18, K.22, W.53, Q.57, K.60 3 PLIP interactions: 3 interactions with chain C Hydrogen bonds: C:R.18, C:K.60, C:K.60 GOL.2: 3 residues within 4Å: Chain C: K.22, A.23, E.26 2 PLIP interactions: 2 interactions with chain C Hydrogen bonds: C:K.22 Water bridges: C:K.22

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lv, M.Q. et al., Structural insights into the recognition of the A/T-rich motif in target gene promoters by the LMX1a homeobox domain. Febs J. (2024)

Release Date

2024-03-06

Peptides

LMX1A factor: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

C
C

LMX1A factor