SMTL ID : 8ikw.3 (3 other biounits)

A complex structure of PGIP-PG

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.94 Å

Oligo State

hetero-1-1-mer

Ligands

1 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 4 residues within 4Å: Chain A: N.87, T.111, N.112, N.135 No protein-ligand interaction detected (PLIP)

1 x NAG- NAG- FUC: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-FUC.2: 2 residues within 4Å: Chain B: N.41, S.69 No protein-ligand interaction detected (PLIP)

1 x NAG- NAG- BMA- MAN- MAN: alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-BMA-MAN-MAN.3: 3 residues within 4Å: Chain B: D.42, T.44, N.70 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Xiao, Y. et al., A plant mechanism of hijacking pathogen virulence factors to trigger innate immunity. Science (2024)

Release Date

2024-02-07

Peptides

Polygalacturonase inhibitor 2: A
Endo-polygalacturonase: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
E

B
F

Polygalacturonase inhibitor 2

Endo-polygalacturonase

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