SMTL ID : 8il5.1

Crystal structure of alcohol oxidase PcAOX(M59V/Q60P/R61N)(Phanerochaete chrysosporium)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

homo-dimer

Ligands

2 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)

FAD.1: 24 residues within 4Å: Chain A: G.17, G.18, G.19, P.20, A.21, I.41, E.42, G.43, A.94, N.95, I.96, G.99, G.100, A.231, R.232, V.233, S.275, S.276, G.277, G.280, I.284, D.597, L.598, A.613 12 PLIP interactions: 12 interactions with chain A Hydrogen bonds: A:G.18, A:A.21, A:G.43, A:G.44, A:A.94, A:I.96, A:G.99, A:G.100, A:V.233, A:V.233, A:S.276, A:L.598 FAD.5: 36 residues within 4Å: Chain B: G.17, G.18, G.19, P.20, A.21, I.41, E.42, G.43, G.44, N.62, P.64, A.94, N.95, I.96, G.99, G.100, S.101, I.103, N.104, F.105, Q.106, M.107, R.232, V.233, S.275, S.276, G.277, G.280, I.284, W.564, D.597, L.598, N.608, T.609, Y.610, A.613 20 PLIP interactions: 20 interactions with chain B Hydrophobic interactions: B:I.103, B:N.104, B:W.564, B:W.564 Hydrogen bonds: B:G.18, B:A.21, B:G.43, B:G.44, B:A.94, B:I.96, B:G.100, B:F.105, B:M.107, B:M.107, B:V.233, B:L.598, B:N.608, B:T.609, B:T.609, B:Y.610

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 6 residues within 4Å: Chain A: N.104, F.105, Q.106, M.107, H.565, N.608 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:N.104, A:F.105, A:M.107, A:N.608 Salt bridges: A:H.565 SO4.3: 2 residues within 4Å: Chain A: R.202, H.203 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:R.202, A:H.203 SO4.4: 3 residues within 4Å: Chain A: N.138, Q.140, H.203 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.138, A:Q.140 Salt bridges: A:H.203

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wu, B. et al., Crystal structure of alcohol oxidase PcAOX(M59V/Q60P/R61N)(Phanerochaete chrysosporium). To Be Published

Release Date

2024-03-06

Peptides

Alcohol oxidase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Alcohol oxidase