SMTL ID : 8ilq.1

Structure of SFTSV Gn-Gc heterodimer

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-mer

Ligands

1 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 2 residues within 4Å: Chain A: H.40, N.63 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:H.40

4 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.2: 2 residues within 4Å: Chain A: N.33, S.35 No protein-ligand interaction detected (PLIP) NAG.3: 1 residues within 4Å: Chain B: N.354 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:N.354 NAG.4: 3 residues within 4Å: Chain B: T.215, P.232, N.293 2 PLIP interactions: 2 interactions with chain B Hydrophobic interactions: B:P.232 Hydrogen bonds: B:N.293 NAG.5: 2 residues within 4Å: Chain B: N.376, L.393 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Du, S. et al., Cryo-EM structure of severe fever with thrombocytopenia syndrome virus. Nat Commun (2023)

Release Date

2023-09-13

Peptides

Envelopment polyprotein: A
Envelopment polyprotein: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Envelopment polyprotein

Envelopment polyprotein

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