SMTL ID : 8imu.1

Dihydroxyacid dehydratase (DHAD) mutant-V497F

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.93 Å

Oligo State

homo-dimer

Ligands

2 x FES: FE2/S2 (INORGANIC) CLUSTER(Non-covalent)

FES.1: 8 residues within 4Å: Chain A: N.64, C.66, S.97, D.98, A.99, C.139, D.140, K.141 1 PLIP interactions: 1 Ligand-Water interactions Metal complexes: H2O.12 FES.4: 7 residues within 4Å: Chain B: N.64, S.97, D.98, A.99, C.139, D.140, K.141 1 PLIP interactions: 1 Ligand-Water interactions Metal complexes: H2O.23

2 x ACT: ACETATE ION(Non-functional Binders)

ACT.2: 3 residues within 4Å: Chain A: P.232, L.250, Y.254 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Y.254, A:Y.254 Water bridges: A:E.247 ACT.5: 4 residues within 4Å: Chain B: P.232, E.247, L.250, Y.254 2 PLIP interactions: 2 interactions with chain B Water bridges: B:P.232, B:E.247

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 8 residues within 4Å: Chain A: A.7, D.8, P.9 Chain B: R.105, F.109, K.550, V.551, L.556 3 PLIP interactions: 1 interactions with chain A, 2 interactions with chain B Hydrogen bonds: A:A.7, B:R.105, B:R.105 GOL.6: 7 residues within 4Å: Chain A: R.105, F.109, V.551, L.556 Chain B: A.7, D.8, P.9 3 PLIP interactions: 1 interactions with chain B, 2 interactions with chain A Hydrogen bonds: B:A.7, A:R.105, A:R.105

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhou, J. et al., Dihydroxyacid dehydratase (DHAD) mutant-V497F. To Be Published

Release Date

2024-03-13

Peptides

Dihydroxy-acid dehydratase, chloroplastic: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Dihydroxy-acid dehydratase, chloroplastic