SMTL ID : 8iov.1

Structure of SARS-CoV-2 XBB.1 spike RBD in complex with ACE2

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-1-1-mer
Ligands
2 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
1 x NAG- NAG- BMA: beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
1 x NAG- NAG- BMA- MAN- MAN: alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
3 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Tamura, T. et al., Virological characteristics of the SARS-CoV-2 XBB variant derived from recombination of two Omicron subvariants. Nat Commun (2023)
Release Date
2023-05-24
Peptides
Processed angiotensin-converting enzyme 2: A
Spike glycoprotein: B
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
B

Processed angiotensin-converting enzyme 2

Spike glycoprotein

Related Entries With Identical Sequence

7xwa.1 | 7xwa.2 | 8if2.1 | 8ios.1 | 8iot.1 | 8iou.1 | 8jyn.1 | 8jyo.1 | 8jyp.1 | 8xlm.1 | 8xln.1 | 8xuy.1 | 8xuz.1 | 8xv0.1 | 8xv1.1 | 8xvm.1 | 9iu1.1