SMTL ID : 8it5.1

Phosphoglycerate mutase 1 complexed with a compound

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

homo-dimer

Ligands

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 5 residues within 4Å: Chain A: W.68, V.81, R.83 Chain B: W.68, R.83 Ligand excluded by PLIP

1 x MES: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID(Non-covalent)

MES.2: 9 residues within 4Å: Chain B: N.17, R.21, F.22, S.23, G.24, R.62, E.89, Y.92 Ligands: QAI.3 7 PLIP interactions: 7 interactions with chain B Hydrogen bonds: B:N.17, B:S.23, B:G.24 Water bridges: B:S.14, B:R.62, B:R.62 Salt bridges: B:R.62

1 x QAI: 5-(4-chlorophenyl)-3-[(4-phenylphenyl)sulfonylamino]thiophene-2-carboxylic acid(Non-covalent)

QAI.3: 13 residues within 4Å: Chain B: N.17, N.20, R.21, F.22, R.90, Y.92, L.95, K.100, V.112, W.115, R.116, P.123 Ligands: MES.2 10 PLIP interactions: 10 interactions with chain B Hydrophobic interactions: B:N.20, B:F.22, B:Y.92, B:L.95, B:K.100, B:K.100, B:V.112, B:W.115 Salt bridges: B:R.116 pi-Stacking: B:F.22

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhou, L. et al., Phosphoglycerate mutase 1 complexed with a compound. To Be Published

Release Date

2024-03-27

Peptides

Phosphoglycerate mutase 1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
C

Phosphoglycerate mutase 1

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