SMTL ID : 8ita.1

A reversible glycosyltransferase of tectorigenin - Bc7OUGT complexed with UDP and tectorigenin

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

monomer

Ligands

1 x R0U: 3-(4-hydroxyphenyl)-6-methoxy-5,7-bis(oxidanyl)chromen-4-one(Non-covalent)

R0U.1: 12 residues within 4Å: Chain A: G.17, H.18, S.21, T.135, F.144, P.180, P.182, F.194, N.364, A.383, E.384 Ligands: UDP.2 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:T.135, A:F.144, A:F.194, A:A.383 Hydrogen bonds: A:H.18, A:S.21, A:S.21, A:T.135, A:N.364 Water bridges: A:M.22 pi-Cation interactions: A:H.18

1 x UDP: URIDINE-5'-DIPHOSPHATE(Non-covalent)

UDP.2: 16 residues within 4Å: Chain A: C.270, G.272, S.273, S.341, W.342, A.343, Q.345, H.360, G.362, W.363, N.364, S.365, E.368, Y.382, Q.385 Ligands: R0U.1 16 PLIP interactions: 16 interactions with chain A Hydrogen bonds: A:S.273, A:A.343, A:A.343, A:Q.345, A:Q.345, A:W.363, A:N.364, A:N.364, A:S.365, A:E.368, A:Y.382, A:Y.382 Water bridges: A:Q.385, A:Q.385 Salt bridges: A:H.360, A:H.360

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cheng, W. et al., Functional characterization and structural basis of a reversible glycosyltransferase involves in plant chemical defence. Plant Biotechnol J (2023)

Release Date

2023-08-23

Peptides

Bc7OUGT: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Bc7OUGT

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