SMTL ID : 8itb.1

Phosphoglycerate mutase 1 complexed with a compound

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.38 Å

Oligo State

homo-dimer

Ligands

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 4 residues within 4Å: Chain A: W.68, R.83 Chain B: W.68, R.83 Ligand excluded by PLIP

1 x MES: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID(Non-covalent)

MES.2: 9 residues within 4Å: Chain B: N.17, R.21, F.22, S.23, G.24, R.62, E.89, Y.92 Ligands: Q9R.3 6 PLIP interactions: 6 interactions with chain B Hydrogen bonds: B:N.17, B:S.23, B:G.24, B:R.62, B:E.89, B:Y.92

2 x Q9R: 5-(3-chloranyl-4-fluoranyl-phenyl)-2-oxidanyl-3-[(4-phenylphenyl)sulfonylamino]benzoic acid(Non-covalent)

Q9R.3: 15 residues within 4Å: Chain B: N.17, N.20, R.21, F.22, R.90, L.95, K.100, V.112, W.115, R.116, P.123, R.191, M.206 Ligands: MES.2, Q9R.4 6 PLIP interactions: 6 interactions with chain B Hydrophobic interactions: B:K.100, B:R.116 Hydrogen bonds: B:R.116, B:R.116 Salt bridges: B:R.116, B:R.191 Q9R.4: 8 residues within 4Å: Chain B: F.22, K.100, T.103, A.104, G.108, E.109, V.112 Ligands: Q9R.3 4 PLIP interactions: 4 interactions with chain B Hydrophobic interactions: B:K.100, B:E.109, B:V.112 Halogen bonds: B:A.104

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhou, L. et al., Phosphoglycerate mutase 1 complexed with a compound. To Be Published

Release Date

2024-03-27

Peptides

Phosphoglycerate mutase 1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
C

Phosphoglycerate mutase 1

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