SMTL ID : 8itc.1

Phosphoglycerate mutase 1 complexed with a compound

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.88 Å

Oligo State

homo-dimer

Ligands

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 5 residues within 4Å: Chain A: W.68, R.83 Chain B: W.68, V.81, R.83 Ligand excluded by PLIP

1 x MES: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID(Non-covalent)

MES.2: 9 residues within 4Å: Chain B: N.17, R.21, F.22, S.23, G.24, R.62, E.89, Y.92 Ligands: QA0.4 10 PLIP interactions: 10 interactions with chain B Hydrogen bonds: B:N.17, B:S.23, B:G.24, B:E.89 Water bridges: B:S.14, B:R.21, B:S.23, B:R.62, B:R.62 Salt bridges: B:R.62

2 x QA0: 5-(4-chlorophenyl)-3-[(4-phenylphenyl)sulfonylamino]phthalic acid(Non-covalent)(Covalent)

QA0.3: 7 residues within 4Å: Chain B: K.100, T.103, A.104, E.109, V.112, K.113 Ligands: QA0.4 4 PLIP interactions: 4 interactions with chain B Hydrophobic interactions: B:K.100, B:A.104, B:E.109, B:V.112 QA0.4: 12 residues within 4Å: Chain B: F.22, R.90, Y.92, L.95, K.100, V.112, K.113, W.115, R.116, R.117 Ligands: MES.2, QA0.3 13 PLIP interactions: 13 interactions with chain B Hydrophobic interactions: B:Y.92, B:V.112, B:K.113, B:W.115, B:R.116 Hydrogen bonds: B:R.116, B:R.116 Water bridges: B:N.209 Salt bridges: B:R.116, B:R.116 pi-Stacking: B:F.22 pi-Cation interactions: B:K.113, B:R.116

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhou, L. et al., Phosphoglycerate mutase 1 complexed with a compound. To Be Published

Release Date

2024-03-27

Peptides

Phosphoglycerate mutase 1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
C

Phosphoglycerate mutase 1

Related Entries With Identical Sequence