SMTL ID : 8itd.1

Phosphoglycerate mutase 1 complexed with a compound

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

homo-dimer

Ligands

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 5 residues within 4Å: Chain A: W.68, R.83 Chain B: W.68, V.81, R.83 Ligand excluded by PLIP

1 x MES: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID(Non-covalent)

MES.2: 9 residues within 4Å: Chain B: N.17, R.21, F.22, S.23, G.24, R.62, E.89, Y.92 Ligands: QA3.3 9 PLIP interactions: 9 interactions with chain B Hydrogen bonds: B:N.17, B:S.23, B:G.24, B:E.89 Water bridges: B:S.14, B:R.62, B:R.62, B:Y.92 Salt bridges: B:R.62

1 x QA3: 4-(4-chloranyl-2-oxidanyl-phenyl)-2-[(4-phenylphenyl)sulfonylamino]benzoic acid(Non-covalent)

QA3.3: 13 residues within 4Å: Chain B: F.22, R.90, Y.92, L.95, K.100, A.104, G.108, E.109, V.112, K.113, W.115, R.116 Ligands: MES.2 13 PLIP interactions: 13 interactions with chain B Hydrophobic interactions: B:F.22, B:L.95, B:K.100, B:A.104, B:E.109, B:V.112, B:V.112, B:W.115 Hydrogen bonds: B:R.116 Water bridges: B:K.100 Salt bridges: B:K.100 pi-Stacking: B:F.22 Halogen bonds: B:R.90

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhou, L. et al., Phosphoglycerate mutase 1 complexed with a compound. To Be Published

Release Date

2024-03-27

Peptides

Phosphoglycerate mutase 1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
C

Phosphoglycerate mutase 1

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