- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.55 Å
- Oligo State
- homo-octamer
- Ligands
- 24 x GOL: GLYCEROL(Non-functional Binders)
- 8 x CA: CALCIUM ION(Non-covalent)
CA.4: 4 residues within 4Å:- Chain A: E.44, N.87, H.259, H.261
5 PLIP interactions:3 interactions with chain A, 2 Ligand-Water interactions- Metal complexes: A:E.44, A:H.259, A:H.261, H2O.1, H2O.3
CA.8: 4 residues within 4Å:- Chain B: E.44, N.87, H.259, H.261
5 PLIP interactions:3 interactions with chain B, 2 Ligand-Water interactions- Metal complexes: B:E.44, B:H.259, B:H.261, H2O.5, H2O.8
CA.12: 4 residues within 4Å:- Chain C: E.44, N.87, H.259, H.261
5 PLIP interactions:3 interactions with chain C, 2 Ligand-Water interactions- Metal complexes: C:E.44, C:H.259, C:H.261, H2O.9, H2O.12
CA.16: 4 residues within 4Å:- Chain D: E.44, N.87, H.259, H.261
5 PLIP interactions:3 interactions with chain D, 2 Ligand-Water interactions- Metal complexes: D:E.44, D:H.259, D:H.261, H2O.14, H2O.17
CA.20: 4 residues within 4Å:- Chain E: E.44, N.87, H.259, H.261
5 PLIP interactions:3 interactions with chain E, 2 Ligand-Water interactions- Metal complexes: E:E.44, E:H.259, E:H.261, H2O.18, H2O.21
CA.24: 4 residues within 4Å:- Chain F: E.44, N.87, H.259, H.261
5 PLIP interactions:3 interactions with chain F, 2 Ligand-Water interactions- Metal complexes: F:E.44, F:H.259, F:H.261, H2O.22, H2O.25
CA.28: 4 residues within 4Å:- Chain G: E.44, N.87, H.259, H.261
5 PLIP interactions:3 interactions with chain G, 2 Ligand-Water interactions- Metal complexes: G:E.44, G:H.259, G:H.261, H2O.27, H2O.30
CA.32: 4 residues within 4Å:- Chain H: E.44, N.87, H.259, H.261
5 PLIP interactions:3 interactions with chain H, 2 Ligand-Water interactions- Metal complexes: H:E.44, H:H.259, H:H.261, H2O.31, H2O.34
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Nakashima, Y. et al., Structure of lasso peptide epimerase MslH reveals metal-dependent acid/base catalytic mechanism. Nat Commun (2023)
- Release Date
- 2023-06-21
- Peptides
- Poly-gamma-glutamate synthesis protein (Capsule biosynthesis protein): ABCDEFGH
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
AE
AF
AG
AH
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.55 Å
- Oligo State
- homo-octamer
- Ligands
- 24 x GOL: GLYCEROL(Non-functional Binders)
- 8 x CA: CALCIUM ION(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Nakashima, Y. et al., Structure of lasso peptide epimerase MslH reveals metal-dependent acid/base catalytic mechanism. Nat Commun (2023)
- Release Date
- 2023-06-21
- Peptides
- Poly-gamma-glutamate synthesis protein (Capsule biosynthesis protein): ABCDEFGH
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
AE
AF
AG
AH
A