SMTL ID : 8iv8.1

Cryo-EM structure of SARS-CoV-2 spike protein in complex with double nAbs 3E2 and 1C4 (local refinement)

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-1-1-mer

Ligands

1 x NAG- NAG- BMA: beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-BMA.1: 3 residues within 4Å: Chain C: N.20 Chain E: D.62, R.65 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sun, H. et al., Two antibodies show broad, synergistic neutralization against SARS-CoV-2 variants by inducing conformational change within the RBD. Protein Cell (2024)

Release Date

2023-08-16

Peptides

light chain of 3E2: A
heavy chain of 3E2: B
Spike protein S1: C
light chain of 1C4: D
heavy chain of 1C4: E

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
L

B
H

C
G

D
D

E
C

light chain of 3E2

heavy chain of 3E2

Spike protein S1

light chain of 1C4

heavy chain of 1C4

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