SMTL ID : 8ix8.1

Crystal structure of Class A beta-lactamase BlaA WT - complex with Tebipenem

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

monomer

Ligands

1 x TEB: (4R,5S)-3-(1-(4,5-dihydrothiazol-2-yl)azetidin-3-ylthio)-5-((2S,3R)-3-hydroxy-1-oxobutan-2-yl)-4-methyl-4,5- dihydro-1H-pyrrole-2-carboxylic acid(Covalent)

TEB.1: 17 residues within 4Å: Chain A: C.74, S.75, K.78, Y.110, S.135, N.137, E.171, P.172, L.174, N.175, T.221, K.239, T.240, G.241, S.242, P.277, R.279 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:S.75, A:Y.110, A:Y.110, A:N.175 Hydrogen bonds: A:S.75, A:K.78, A:S.135, A:N.137, A:S.242 Water bridges: A:R.279 Salt bridges: A:K.239

3 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.2: 3 residues within 4Å: Chain A: P.32, A.33, S.34 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:A.33 Water bridges: A:S.34 PO4.3: 4 residues within 4Å: Chain A: H.103, E.104, S.105, L.118 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.104 Salt bridges: A:H.103 PO4.4: 2 residues within 4Å: Chain A: N.141, W.170 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bhattacharya, S. et al., Crystal structure of Class A beta-lactamase BlaA WT - complex with Tebipenem. To be published

Release Date

2024-04-03

Peptides

Beta-lactamase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Beta-lactamase

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