SMTL ID : 8j1c.2 (1 other biounit)

Structure of amino acid dehydrogenase in complex with NADP

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

homo-dimer

Ligands

2 x IMD: IMIDAZOLE(Non-covalent)

IMD.1: 6 residues within 4Å: Chain A: D.54, I.56, S.73, Y.75, T.224, N.225 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:S.73 IMD.3: 5 residues within 4Å: Chain B: D.54, I.56, S.73, Y.75, T.224 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:D.54

1 x NAP: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)

NAP.2: 22 residues within 4Å: Chain B: T.108, R.111, T.112, G.135, S.136, G.137, K.138, V.139, S.160, P.161, S.162, T.201, S.202, S.203, V.207, I.222, S.223, T.224, N.225, S.296, I.297, G.298 17 PLIP interactions: 17 interactions with chain B Hydrophobic interactions: B:T.108 Hydrogen bonds: B:R.111, B:S.136, B:S.136, B:G.137, B:G.137, B:K.138, B:V.139, B:S.160, B:S.162, B:S.162, B:S.202, B:S.203, B:S.203, B:I.222, B:T.224, B:N.225

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kawakami, R. et al., First crystal structure of an NADP + -dependent l-arginine dehydrogenase belonging to the mu-crystallin family. Int.J.Biol.Macromol. (2023)

Release Date

2023-08-16

Peptides

Ornithine cyclodeaminase family protein: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

Ornithine cyclodeaminase family protein

Related Entries With Identical Sequence